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  5. Zm00001e028615_P001

Zm00001e028615_P001


Description : Protein trichome berefringence-like 7 OS=Arabidopsis thaliana (sp|f4i037|tbl7_arath : 427.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0004349 (LandPlants) Phylogenetic Tree(s): OG_05_0004349_tree ,
OG_06_0003735 (SeedPlants) Phylogenetic Tree(s): OG_06_0003735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028615_P001
Cluster HCCA: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00120690 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT5G19160 TBL11 TRICHOME BIREFRINGENCE-LIKE 11 0.03 Archaeplastida
GSVIVT01020682001 No alias Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020723001 No alias Protein trichome birefringence-like 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01028123001 No alias Protein trichome birefringence-like 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01033900001 No alias Protein trichome birefringence-like 8 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_19983 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.05 Archaeplastida
Gb_36284 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_9645753g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g006990.2.1 No alias Protein trichome birefringence-like 36 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e020302_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 89 141
IPR026057 PC-Esterase 142 414
No external refs found!