Zm00001e029052_P001

Description : transcription factor (HSF)

Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree ,
OG_06_0006541 (SeedPlants) Phylogenetic Tree(s): OG_06_0006541_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e029052_P001
Cluster	HCCA: Cluster_193

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00264800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AMTR_s00040p00209530	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
AMTR_s00176p00025440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AT2G26150	HSFA2, ATHSFA2	heat shock transcription factor A2	0.03	Archaeplastida
AT3G02990	HSFA1E, ATHSFA1E	heat shock transcription factor A1E	0.03	Archaeplastida
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.04	Archaeplastida
AT5G62020	AT-HSFB2A, HSFB2A	heat shock transcription factor B2A	0.04	Archaeplastida
GSVIVT01021269001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
GSVIVT01022134001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01033257001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
Gb_11758	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	Archaeplastida
LOC_Os03g12370.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
LOC_Os03g53340.2	No alias	transcription factor (HSF)	0.04	Archaeplastida
LOC_Os04g48030.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os05g45410.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os06g36930.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os08g43334.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os10g28340.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
MA_110587g0010	No alias	transcription factor (HSF)	0.02	Archaeplastida
MA_5374g0010	No alias	transcription factor (HSF)	0.04	Archaeplastida
Pp3c1_32480V3.1	No alias	heat shock factor 3	0.04	Archaeplastida
Solyc02g072000.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc02g090820.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc03g026020.3.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
Solyc08g076590.3.1	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.04	Archaeplastida
Solyc08g080540.3.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
Solyc09g059520.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006260	DNA replication	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006777	Mo-molybdopterin cofactor biosynthetic process	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
CC	GO:0019008	molybdopterin synthase complex	IEP	Neighborhood
BP	GO:0019720	Mo-molybdopterin cofactor metabolic process	IEP	Neighborhood
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0051189	prosthetic group metabolic process	IEP	Neighborhood
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	10	99

External Links

No external refs found!

Zm00001e029052_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation