- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (bHLH)
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e029147_P001 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G68240 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.1 | Archaeplastida | |
| AT2G46970 | PIL1 | phytochrome interacting factor 3-like 1 | 0.02 | Archaeplastida | |
| AT3G21330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| AT3G50330 | HEC2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| AT4G00120 | GT140, IND1, IND, EDA33 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.07 | Archaeplastida | |
| AT4G36930 | SPT | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT5G09750 | HEC3 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT5G67060 | HEC1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| AT5G67110 | ALC | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| GSVIVT01030333001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| GSVIVT01031338001 | No alias | External stimuli response.light.red/far red light.PIF... | 0.04 | Archaeplastida | |
| Gb_27869 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os01g61480.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os05g46370.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os06g30090.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| LOC_Os06g47980.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| LOC_Os08g01700.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os09g28210.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os12g32400.1 | No alias | transcription factor (bHLH) | 0.06 | Archaeplastida | |
| MA_100071g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_78485g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Pp3c10_19020V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Pp3c1_40040V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c25_13740V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c2_8960V3.1 | No alias | phytochrome interacting factor 3 | 0.02 | Archaeplastida | |
| Pp3c3_8460V3.1 | No alias | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.02 | Archaeplastida | |
| Smo409967 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | Archaeplastida | |
| Solyc01g107140.3.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Solyc02g091440.2.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Solyc02g093280.2.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Solyc03g044460.1.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Solyc04g077960.1.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Solyc09g005070.1.1 | No alias | transcription factor (bHLH) | 0.07 | Archaeplastida | |
| Solyc12g088380.1.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Solyc12g088790.3.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e019392_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e021883_P001 | No alias | transcription factor (bHLH) | 0.08 | Archaeplastida | |
| Zm00001e025454_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004451 | isocitrate lyase activity | IEP | Neighborhood |
| MF | GO:0004474 | malate synthase activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| MF | GO:0005507 | copper ion binding | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006097 | glyoxylate cycle | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| MF | GO:0010333 | terpene synthase activity | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016829 | lyase activity | IEP | Neighborhood |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | Neighborhood |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0046487 | glyoxylate metabolic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 194 | 233 |
| No external refs found! |