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  5. Zm00001e029965_P002

Zm00001e029965_P002


Description : component beta type-1 of 26S proteasome


Gene families : OG0004585 (Archaeplastida) Phylogenetic Tree(s): OG0004585_tree ,
OG_05_0006234 (LandPlants) Phylogenetic Tree(s): OG_05_0006234_tree ,
OG_06_0006497 (SeedPlants) Phylogenetic Tree(s): OG_06_0006497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029965_P002
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT4G31300 PBA1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.05 Archaeplastida
Cpa|evm.model.tig00001098.5 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
Cre06.g279000 No alias Protein degradation.26S proteasome.20S core... 0.11 Archaeplastida
Cre12.g531100 No alias Protein degradation.26S proteasome.20S core... 0.12 Archaeplastida
GSVIVT01032253001 No alias Protein degradation.26S proteasome.20S core... 0.12 Archaeplastida
LOC_Os02g53060.1 No alias component beta type-1 of 26S proteasome 0.08 Archaeplastida
LOC_Os06g04800.1 No alias component beta type-1 of 26S proteasome 0.03 Archaeplastida
Mp6g09980.1 No alias component beta type-1 of 26S proteasome 0.05 Archaeplastida
Pp3c18_17380V3.1 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.05 Archaeplastida
Smo227897 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0047750 cholestenol delta-isomerase activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 22 202
No external refs found!