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  5. Zm00001e030465_P001

Zm00001e030465_P001


Description : component beta type-3 of 26S proteasome


Gene families : OG0003815 (Archaeplastida) Phylogenetic Tree(s): OG0003815_tree ,
OG_05_0004658 (LandPlants) Phylogenetic Tree(s): OG_05_0004658_tree ,
OG_06_0004913 (SeedPlants) Phylogenetic Tree(s): OG_06_0004913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030465_P001
Cluster HCCA: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00168080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
AT1G21720 PBC1 proteasome beta subunit C1 0.08 Archaeplastida
AT1G77440 PBC2 20S proteasome beta subunit C2 0.06 Archaeplastida
Cre06.g267500 No alias Protein degradation.26S proteasome.20S core... 0.1 Archaeplastida
GSVIVT01008836001 No alias Protein degradation.26S proteasome.20S core... 0.09 Archaeplastida
Gb_09326 No alias component beta type-3 of 26S proteasome 0.06 Archaeplastida
Gb_29749 No alias component beta type-3 of 26S proteasome 0.06 Archaeplastida
LOC_Os02g08520.1 No alias component beta type-3 of 26S proteasome 0.04 Archaeplastida
LOC_Os06g43570.1 No alias component beta type-3 of 26S proteasome 0.09 Archaeplastida
MA_549126g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_70161g0010 No alias component beta type-3 of 26S proteasome 0.03 Archaeplastida
Mp7g15370.1 No alias component beta type-3 of 26S proteasome 0.05 Archaeplastida
Pp3c11_25990V3.1 No alias 20S proteasome beta subunit C2 0.07 Archaeplastida
Solyc04g009410.3.1 No alias component beta type-3 of 26S proteasome 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 187
No external refs found!