AT3G46440 (UXS5)

Aliases : UXS5

Description : UDP-XYL synthase 5

Gene families : OG0000787 (Archaeplastida) Phylogenetic Tree(s): OG0000787_tree ,
OG_05_0004259 (LandPlants) Phylogenetic Tree(s): OG_05_0004259_tree ,
OG_06_0004007 (SeedPlants) Phylogenetic Tree(s): OG_06_0004007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G46440
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc09g075120.3.1	No alias	UDP-D-glucuronic acid decarboxylase	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	ISS	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009746	response to hexose	None	Extended
BP	GO:0009749	response to glucose	RCA	Interproscan
BP	GO:0009750	response to fructose	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0019321	pentose metabolic process	None	Extended
BP	GO:0034284	response to monosaccharide	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042732	D-xylose metabolic process	RCA	Interproscan
BP	GO:0042732	D-xylose metabolic process	TAS	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048040	UDP-glucuronate decarboxylase activity	ISS	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	Neighborhood
BP	GO:0006643	membrane lipid metabolic process	IEP	Neighborhood
BP	GO:0006664	glycolipid metabolic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0006833	water transport	IEP	Neighborhood
BP	GO:0006863	purine nucleobase transport	IEP	Neighborhood
BP	GO:0007059	chromosome segregation	IEP	Neighborhood
BP	GO:0007062	sister chromatid cohesion	IEP	Neighborhood
BP	GO:0007131	reciprocal meiotic recombination	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0009247	glycolipid biosynthetic process	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009887	animal organ morphogenesis	IEP	Neighborhood
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
BP	GO:0010638	positive regulation of organelle organization	IEP	Neighborhood
BP	GO:0015851	nucleobase transport	IEP	Neighborhood
BP	GO:0016036	cellular response to phosphate starvation	IEP	Neighborhood
BP	GO:0016926	protein desumoylation	IEP	Neighborhood
BP	GO:0019374	galactolipid metabolic process	IEP	Neighborhood
BP	GO:0019375	galactolipid biosynthetic process	IEP	Neighborhood
BP	GO:0031048	chromatin silencing by small RNA	IEP	Neighborhood
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0033044	regulation of chromosome organization	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0035825	homologous recombination	IEP	Neighborhood
BP	GO:0042044	fluid transport	IEP	Neighborhood
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0045132	meiotic chromosome segregation	IEP	Neighborhood
BP	GO:0045892	negative regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048523	negative regulation of cellular process	IEP	Neighborhood
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0061982	meiosis I cell cycle process	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	Neighborhood
BP	GO:0098813	nuclear chromosome segregation	IEP	Neighborhood
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Neighborhood
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1903509	liposaccharide metabolic process	IEP	Neighborhood
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR016040	NAD(P)-bd_dom	32	326

External Links

No external refs found!

AT3G46440 (UXS5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation