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  5. Zm00001e031648_P001

Zm00001e031648_P001


Description : no hits & (original description: none)


Gene families : OG0007652 (Archaeplastida) Phylogenetic Tree(s): OG0007652_tree ,
OG_05_0006373 (LandPlants) Phylogenetic Tree(s): OG_05_0006373_tree ,
OG_06_0006424 (SeedPlants) Phylogenetic Tree(s): OG_06_0006424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031648_P001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00197p00040880 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g30780... 0.02 Archaeplastida
AT2G30780 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
GSVIVT01011040001 No alias Pentatricopeptide repeat-containing protein At2g30780... 0.03 Archaeplastida
LOC_Os05g33760.1 No alias Pentatricopeptide repeat-containing protein At2g30780... 0.09 Archaeplastida
MA_898819g0010 No alias Pentatricopeptide repeat-containing protein At2g30780... 0.02 Archaeplastida
Pp3c1_37670V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!