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Aliases : LCR48
Description : low-molecular-weight cysteine-rich 48
Gene families : OG0007532 (Archaeplastida) Phylogenetic Tree(s): OG0007532_tree ,
OG_05_0005603 (LandPlants) Phylogenetic Tree(s): OG_05_0005603_tree ,
OG_06_0003623 (SeedPlants) Phylogenetic Tree(s): OG_06_0003623_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G48231 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G32763 | No alias | Cysteine-rich protein | 0.06 | Archaeplastida | |
| AT2G03937 | No alias | Defensin-like (DEFL) family protein | 0.01 | Archaeplastida | |
| AT2G33233 | LCR49 | low-molecular-weight cysteine-rich 49 | 0.05 | Archaeplastida | |
| AT3G04540 | No alias | Cysteine-rich protein | 0.07 | Archaeplastida | |
| AT3G04545 | No alias | Cysteine-rich protein | 0.09 | Archaeplastida | |
| AT3G17155 | No alias | Cysteine-rich protein | 0.07 | Archaeplastida | |
| AT5G19172 | No alias | Cysteine-rich protein | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004126 | cytidine deaminase activity | IEP | Neighborhood |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005199 | structural constituent of cell wall | IEP | Neighborhood |
| CC | GO:0005615 | extracellular space | IEP | Neighborhood |
| BP | GO:0005983 | starch catabolic process | IEP | Neighborhood |
| BP | GO:0006349 | regulation of gene expression by genetic imprinting | IEP | Neighborhood |
| BP | GO:0006624 | vacuolar protein processing | IEP | Neighborhood |
| MF | GO:0008474 | palmitoyl-(protein) hydrolase activity | IEP | Neighborhood |
| BP | GO:0008655 | pyrimidine-containing compound salvage | IEP | Neighborhood |
| BP | GO:0009251 | glucan catabolic process | IEP | Neighborhood |
| CC | GO:0009505 | plant-type cell wall | IEP | Neighborhood |
| BP | GO:0009812 | flavonoid metabolic process | IEP | Neighborhood |
| BP | GO:0009813 | flavonoid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009964 | negative regulation of flavonoid biosynthetic process | IEP | Neighborhood |
| BP | GO:0010048 | vernalization response | IEP | Neighborhood |
| BP | GO:0010214 | seed coat development | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| MF | GO:0016711 | flavonoid 3'-monooxygenase activity | IEP | Neighborhood |
| MF | GO:0019239 | deaminase activity | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| MF | GO:0033729 | anthocyanidin reductase activity | IEP | Neighborhood |
| BP | GO:0044247 | cellular polysaccharide catabolic process | IEP | Neighborhood |
| MF | GO:0050113 | inositol oxygenase activity | IEP | Neighborhood |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0071514 | genetic imprinting | IEP | Neighborhood |
| BP | GO:0080027 | response to herbivore | IEP | Neighborhood |
| MF | GO:0098599 | palmitoyl hydrolase activity | IEP | Neighborhood |
| BP | GO:2000014 | regulation of endosperm development | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |