AT3G48231 (LCR48)


Aliases : LCR48

Description : low-molecular-weight cysteine-rich 48


Gene families : OG0007532 (Archaeplastida) Phylogenetic Tree(s): OG0007532_tree ,
OG_05_0005603 (LandPlants) Phylogenetic Tree(s): OG_05_0005603_tree ,
OG_06_0003623 (SeedPlants) Phylogenetic Tree(s): OG_06_0003623_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48231
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G32763 No alias Cysteine-rich protein 0.06 Archaeplastida
AT2G03937 No alias Defensin-like (DEFL) family protein 0.01 Archaeplastida
AT2G33233 LCR49 low-molecular-weight cysteine-rich 49 0.05 Archaeplastida
AT3G04540 No alias Cysteine-rich protein 0.07 Archaeplastida
AT3G04545 No alias Cysteine-rich protein 0.09 Archaeplastida
AT3G17155 No alias Cysteine-rich protein 0.07 Archaeplastida
AT5G19172 No alias Cysteine-rich protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
BP GO:0005983 starch catabolic process IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
BP GO:0006624 vacuolar protein processing IEP Neighborhood
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Neighborhood
BP GO:0008655 pyrimidine-containing compound salvage IEP Neighborhood
BP GO:0009251 glucan catabolic process IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0009964 negative regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0010214 seed coat development IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016711 flavonoid 3'-monooxygenase activity IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0033729 anthocyanidin reductase activity IEP Neighborhood
BP GO:0044247 cellular polysaccharide catabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0080027 response to herbivore IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood
BP GO:2000014 regulation of endosperm development IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!