AT3G48590 (HAP5A, NF-YC1, ATHAP5A)


Aliases : HAP5A, NF-YC1, ATHAP5A

Description : nuclear factor Y, subunit C1


Gene families : OG0000443 (Archaeplastida) Phylogenetic Tree(s): OG0000443_tree ,
OG_05_0000515 (LandPlants) Phylogenetic Tree(s): OG_05_0000515_tree ,
OG_06_0000553 (SeedPlants) Phylogenetic Tree(s): OG_06_0000553_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48590
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00054980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
GSVIVT01008570001 No alias Nuclear transcription factor Y subunit C-1... 0.04 Archaeplastida
LOC_Os03g14669.2 No alias component NF-YC of NF-Y transcription factor complex 0.03 Archaeplastida
MA_161407g0010 No alias component NF-YC of NF-Y transcription factor complex 0.02 Archaeplastida
Mp2g25260.1 No alias transcription factor (DPB3) 0.02 Archaeplastida
Pp3c10_2910V3.1 No alias nuclear factor Y, subunit C2 0.01 Archaeplastida
Zm00001e001054_P002 No alias component NF-YC of NF-Y transcription factor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005634 nucleus IC Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
CC GO:0016602 CCAAT-binding factor complex ISS Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Interproscan
Type GO Term Name Evidence Source
MF GO:0004040 amidase activity IEP Neighborhood
MF GO:0004161 dimethylallyltranstransferase activity IEP Neighborhood
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
CC GO:0005778 peroxisomal membrane IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006775 fat-soluble vitamin metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009637 response to blue light IEP Neighborhood
BP GO:0009683 indoleacetic acid metabolic process IEP Neighborhood
BP GO:0009684 indoleacetic acid biosynthetic process IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009851 auxin biosynthetic process IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010114 response to red light IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
BP GO:0010161 red light signaling pathway IEP Neighborhood
BP GO:0010189 vitamin E biosynthetic process IEP Neighborhood
BP GO:0010218 response to far red light IEP Neighborhood
MF GO:0010276 phytol kinase activity IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
CC GO:0030076 light-harvesting complex IEP Neighborhood
CC GO:0031903 microbody membrane IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0042360 vitamin E metabolic process IEP Neighborhood
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP Neighborhood
MF GO:0043864 indoleacetamide hydrolase activity IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071491 cellular response to red light IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood
BP GO:2000030 regulation of response to red or far red light IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 65 128
No external refs found!