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  5. Zm00001e037178_P001

Zm00001e037178_P001


Description : no description available(sp|f4is91|rsa1_arath : 313.0)


Gene families : OG0006024 (Archaeplastida) Phylogenetic Tree(s): OG0006024_tree ,
OG_05_0007199 (LandPlants) Phylogenetic Tree(s): OG_05_0007199_tree ,
OG_06_0008654 (SeedPlants) Phylogenetic Tree(s): OG_06_0008654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037178_P001
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00266660 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT2G03150 emb1579 ATP/GTP-binding protein family 0.08 Archaeplastida
Cre06.g283634 No alias No description available 0.06 Archaeplastida
GSVIVT01019950001 No alias No description available 0.06 Archaeplastida
Gb_35997 No alias no description available(sp|f4is91|rsa1_arath : 258.0) 0.05 Archaeplastida
Mp7g18160.1 No alias no description available(sp|f4is91|rsa1_arath : 184.0) 0.03 Archaeplastida
Pp3c12_12730V3.1 No alias ATP/GTP-binding protein family 0.06 Archaeplastida
Pp3c4_10880V3.1 No alias ATP/GTP-binding protein family 0.02 Archaeplastida
Smo443360 No alias No description available 0.04 Archaeplastida
Solyc04g008680.4.1 No alias no description available(sp|f4is91|rsa1_arath : 275.0) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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    • Type GO Term Name Evidence Source
    MF GO:0000166 nucleotide binding IEP Neighborhood
    BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
    BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
    BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
    BP GO:0001510 RNA methylation IEP Neighborhood
    MF GO:0003674 molecular_function IEP Neighborhood
    MF GO:0003676 nucleic acid binding IEP Neighborhood
    MF GO:0003677 DNA binding IEP Neighborhood
    MF GO:0003682 chromatin binding IEP Neighborhood
    MF GO:0003689 DNA clamp loader activity IEP Neighborhood
    MF GO:0003723 RNA binding IEP Neighborhood
    MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
    MF GO:0005488 binding IEP Neighborhood
    MF GO:0005515 protein binding IEP Neighborhood
    MF GO:0005524 ATP binding IEP Neighborhood
    CC GO:0005634 nucleus IEP Neighborhood
    CC GO:0005663 DNA replication factor C complex IEP Neighborhood
    BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
    BP GO:0006259 DNA metabolic process IEP Neighborhood
    BP GO:0006260 DNA replication IEP Neighborhood
    BP GO:0006325 chromatin organization IEP Neighborhood
    BP GO:0006338 chromatin remodeling IEP Neighborhood
    BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
    BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
    BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
    BP GO:0006396 RNA processing IEP Neighborhood
    BP GO:0006397 mRNA processing IEP Neighborhood
    BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
    BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
    BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
    MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
    MF GO:0008144 drug binding IEP Neighborhood
    BP GO:0008380 RNA splicing IEP Neighborhood
    BP GO:0009056 catabolic process IEP Neighborhood
    BP GO:0009057 macromolecule catabolic process IEP Neighborhood
    BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
    BP GO:0009451 RNA modification IEP Neighborhood
    BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
    BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
    BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
    BP GO:0009987 cellular process IEP Neighborhood
    BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
    BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
    BP GO:0010628 positive regulation of gene expression IEP Neighborhood
    BP GO:0016043 cellular component organization IEP Neighborhood
    BP GO:0016070 RNA metabolic process IEP Neighborhood
    BP GO:0016071 mRNA metabolic process IEP Neighborhood
    MF GO:0016462 pyrophosphatase activity IEP Neighborhood
    MF GO:0016787 hydrolase activity IEP Neighborhood
    MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
    MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
    MF GO:0017076 purine nucleotide binding IEP Neighborhood
    MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
    BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
    MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
    BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
    BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
    MF GO:0031491 nucleosome binding IEP Neighborhood
    BP GO:0032259 methylation IEP Neighborhood
    MF GO:0032553 ribonucleotide binding IEP Neighborhood
    MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
    MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
    BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Neighborhood
    BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Neighborhood
    BP GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter IEP Neighborhood
    MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
    MF GO:0034061 DNA polymerase activity IEP Neighborhood
    BP GO:0034243 regulation of transcription elongation from RNA polymerase II promoter IEP Neighborhood
    BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
    MF GO:0036094 small molecule binding IEP Neighborhood
    BP GO:0036260 RNA capping IEP Neighborhood
    MF GO:0042393 histone binding IEP Neighborhood
    BP GO:0043044 ATP-dependent chromatin remodeling IEP Neighborhood
    MF GO:0043167 ion binding IEP Neighborhood
    MF GO:0043168 anion binding IEP Neighborhood
    BP GO:0043170 macromolecule metabolic process IEP Neighborhood
    CC GO:0043226 organelle IEP Neighborhood
    CC GO:0043227 membrane-bounded organelle IEP Neighborhood
    CC GO:0043229 intracellular organelle IEP Neighborhood
    CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
    BP GO:0043414 macromolecule methylation IEP Neighborhood
    BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
    BP GO:0044237 cellular metabolic process IEP Neighborhood
    BP GO:0044238 primary metabolic process IEP Neighborhood
    BP GO:0044248 cellular catabolic process IEP Neighborhood
    BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
    CC GO:0044424 intracellular part IEP Neighborhood
    CC GO:0044464 cell part IEP Neighborhood
    MF GO:0044877 protein-containing complex binding IEP Neighborhood
    BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
    BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
    BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Neighborhood
    BP GO:0046483 heterocycle metabolic process IEP Neighborhood
    BP GO:0048518 positive regulation of biological process IEP Neighborhood
    BP GO:0048522 positive regulation of cellular process IEP Neighborhood
    BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
    BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
    BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
    BP GO:0071704 organic substance metabolic process IEP Neighborhood
    BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
    BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
    MF GO:0097159 organic cyclic compound binding IEP Neighborhood
    MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
    MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
    BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
    MF GO:1901363 heterocyclic compound binding IEP Neighborhood
    BP GO:1901575 organic substance catabolic process IEP Neighborhood
    BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
    BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
    InterPro domains Description Start Stop
    IPR025954 DBC1/CARP1_inactive_NUDIX_dom 578 694
    No external refs found!