Zm00001e037696_P002

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e037696_P002
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00225230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G51190	PLT2	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G17430	BBM	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
LOC_Os01g67410.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
LOC_Os02g40070.1	No alias	transcription factor (AP2)	0.06	Archaeplastida
LOC_Os03g07940.1	No alias	transcription factor (AP2)	0.07	Archaeplastida
LOC_Os03g56050.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os04g42570.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
LOC_Os06g44750.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
LOC_Os07g03250.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os07g13170.2	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os11g19060.1	No alias	transcription factor (AP2)	0.06	Archaeplastida
MA_113625g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_196219g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.04	Archaeplastida
Mp8g11450.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Pp3c12_12460V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc11g072600.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e029525_P003	No alias	transcription factor (AP2)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
BP	GO:0035434	copper ion transmembrane transport	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	242	292
IPR001471	AP2/ERF_dom	140	198

External Links

No external refs found!

Zm00001e037696_P002

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation