AT1G15660 (CENP-C)


Aliases : CENP-C

Description : centromere protein C


Gene families : OG0004205 (Archaeplastida) Phylogenetic Tree(s): OG0004205_tree ,
OG_05_0003811 (LandPlants) Phylogenetic Tree(s): OG_05_0003811_tree ,
OG_06_0004866 (SeedPlants) Phylogenetic Tree(s): OG_06_0004866_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G15660
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017152001 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 Archaeplastida
LOC_Os01g43050.1 No alias kinetochore assembly protein (CENP-C) 0.04 Archaeplastida
Mp8g10620.1 No alias kinetochore assembly protein (CENP-C) 0.03 Archaeplastida
Solyc03g120340.3.1 No alias kinetochore assembly protein (CENP-C) 0.07 Archaeplastida
Zm00001e020459_P001 No alias kinetochore assembly protein (CENP-C) 0.04 Archaeplastida
Zm00001e027879_P001 No alias kinetochore assembly protein (CENP-C) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000280 nuclear division RCA Interproscan
CC GO:0000775 chromosome, centromeric region IDA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006260 DNA replication RCA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
BP GO:0006342 chromatin silencing RCA Interproscan
BP GO:0008283 cell proliferation RCA Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0016572 histone phosphorylation RCA Interproscan
BP GO:0042023 DNA endoreduplication RCA Interproscan
BP GO:0051225 spindle assembly RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP Neighborhood
BP GO:0000086 G2/M transition of mitotic cell cycle IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000217 DNA secondary structure binding IEP Neighborhood
CC GO:0000228 nuclear chromosome IEP Neighborhood
BP GO:0000281 mitotic cytokinesis IEP Neighborhood
MF GO:0000400 four-way junction DNA binding IEP Neighborhood
MF GO:0000403 Y-form DNA binding IEP Neighborhood
MF GO:0000404 heteroduplex DNA loop binding IEP Neighborhood
MF GO:0000406 double-strand/single-strand DNA junction binding IEP Neighborhood
BP GO:0000710 meiotic mismatch repair IEP Neighborhood
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
CC GO:0000796 condensin complex IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
BP GO:0000912 assembly of actomyosin apparatus involved in cytokinesis IEP Neighborhood
BP GO:0000914 phragmoplast assembly IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Neighborhood
MF GO:0004839 ubiquitin activating enzyme activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0006290 pyrimidine dimer repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006311 meiotic gene conversion IEP Neighborhood
BP GO:0006312 mitotic recombination IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
BP GO:0006379 mRNA cleavage IEP Neighborhood
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007006 mitochondrial membrane organization IEP Neighborhood
BP GO:0007007 inner mitochondrial membrane organization IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0009008 DNA-methyltransferase activity IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009887 animal organ morphogenesis IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009934 regulation of meristem structural organization IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010026 trichome differentiation IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
BP GO:0010069 zygote asymmetric cytokinesis in embryo sac IEP Neighborhood
BP GO:0010070 zygote asymmetric cell division IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
BP GO:0010425 DNA methylation on cytosine within a CNG sequence IEP Neighborhood
BP GO:0010520 regulation of reciprocal meiotic recombination IEP Neighborhood
BP GO:0010589 leaf proximal/distal pattern formation IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010948 negative regulation of cell cycle process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030619 U1 snRNA binding IEP Neighborhood
MF GO:0030620 U2 snRNA binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031497 chromatin assembly IEP Neighborhood
BP GO:0031507 heterochromatin assembly IEP Neighborhood
MF GO:0032135 DNA insertion or deletion binding IEP Neighborhood
MF GO:0032137 guanine/thymine mispair binding IEP Neighborhood
MF GO:0032138 single base insertion or deletion binding IEP Neighborhood
CC GO:0032300 mismatch repair complex IEP Neighborhood
CC GO:0032301 MutSalpha complex IEP Neighborhood
CC GO:0032302 MutSbeta complex IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032776 DNA methylation on cytosine IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
CC GO:0033186 CAF-1 complex IEP Neighborhood
MF GO:0034046 poly(G) binding IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035279 mRNA cleavage involved in gene silencing by miRNA IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0035822 gene conversion IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0040020 regulation of meiotic nuclear division IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043570 maintenance of DNA repeat elements IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0044770 cell cycle phase transition IEP Neighborhood
BP GO:0044772 mitotic cell cycle phase transition IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0044839 cell cycle G2/M phase transition IEP Neighborhood
BP GO:0045039 protein import into mitochondrial inner membrane IEP Neighborhood
BP GO:0045128 negative regulation of reciprocal meiotic recombination IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0045787 positive regulation of cell cycle IEP Neighborhood
BP GO:0045835 negative regulation of meiotic nuclear division IEP Neighborhood
BP GO:0045910 negative regulation of DNA recombination IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051445 regulation of meiotic cell cycle IEP Neighborhood
BP GO:0051447 negative regulation of meiotic cell cycle IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051783 regulation of nuclear division IEP Neighborhood
BP GO:0051784 negative regulation of nuclear division IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0055046 microgametogenesis IEP Neighborhood
BP GO:0060631 regulation of meiosis I IEP Neighborhood
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
MF GO:0070717 poly-purine tract binding IEP Neighborhood
BP GO:0070828 heterochromatin organization IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080175 phragmoplast microtubule organization IEP Neighborhood
BP GO:0090151 establishment of protein localization to mitochondrial membrane IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
BP GO:0098795 mRNA cleavage involved in gene silencing IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:0110029 negative regulation of meiosis I IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
CC GO:1990391 DNA repair complex IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
MF GO:1990939 ATP-dependent microtubule motor activity IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000242 negative regulation of reproductive process IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!