AT3G53370

Description : S1FA-like DNA-binding protein

Gene families : OG0007480 (Archaeplastida) Phylogenetic Tree(s): OG0007480_tree ,
OG_05_0005543 (LandPlants) Phylogenetic Tree(s): OG_05_0005543_tree ,
OG_06_0005546 (SeedPlants) Phylogenetic Tree(s): OG_06_0005546_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G53370
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os04g33420.1	No alias	transcription factor (S1Fa)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Neighborhood
CC	GO:0000930	gamma-tubulin complex	IEP	Neighborhood
CC	GO:0000931	gamma-tubulin large complex	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
BP	GO:0006505	GPI anchor metabolic process	IEP	Neighborhood
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Neighborhood
BP	GO:0006644	phospholipid metabolic process	IEP	Neighborhood
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Neighborhood
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Neighborhood
BP	GO:0007020	microtubule nucleation	IEP	Neighborhood
CC	GO:0008274	gamma-tubulin ring complex	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030118	clathrin coat	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030125	clathrin vesicle coat	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044450	microtubule organizing center part	IEP	Neighborhood
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Neighborhood
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0046486	glycerolipid metabolic process	IEP	Neighborhood
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0051418	microtubule nucleation by microtubule organizing center	IEP	Neighborhood
MF	GO:0051751	alpha-1,4-mannosyltransferase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006779	S1FA_DNA-bd	12	76

External Links

No external refs found!