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  5. Zm00001e039396_P004

Zm00001e039396_P004


Description : cationic amino acid transporter (CAT)


Gene families : OG0000547 (Archaeplastida) Phylogenetic Tree(s): OG0000547_tree ,
OG_05_0002054 (LandPlants) Phylogenetic Tree(s): OG_05_0002054_tree ,
OG_06_0001934 (SeedPlants) Phylogenetic Tree(s): OG_06_0001934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039396_P004
Cluster HCCA: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00166780 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 Archaeplastida
AMTR_s00035p00052900 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
AMTR_s00114p00137590 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
LOC_Os01g11160.1 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
LOC_Os03g43970.1 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida
LOC_Os06g34830.1 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
LOC_Os11g05690.2 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
MA_10433254g0010 No alias Cationic amino acid transporter 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_78005g0010 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Pp3c5_24930V3.1 No alias cationic amino acid transporter 6 0.04 Archaeplastida
Solyc08g077810.2.1 No alias Cationic amino acid transporter 6, chloroplastic... 0.04 Archaeplastida
Solyc11g006710.2.1 No alias cationic amino acid transporter (CAT) 0.06 Archaeplastida
Zm00001e005030_P001 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e030690_P001 No alias cationic amino acid transporter (CAT) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 81 488
IPR029485 CAT_C 532 582
No external refs found!