Description : E3 ubiquitin ligase (PUB)
Gene families : OG0001274 (Archaeplastida) Phylogenetic Tree(s): OG0001274_tree ,
OG_05_0002218 (LandPlants) Phylogenetic Tree(s): OG_05_0002218_tree ,
OG_06_0003881 (SeedPlants) Phylogenetic Tree(s): OG_06_0003881_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e039535_P001 | |
Cluster | HCCA: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00044p00145170 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | Archaeplastida | |
GSVIVT01024723001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
Gb_23646 | No alias | E3 ubiquitin ligase (PUB) | 0.03 | Archaeplastida | |
LOC_Os12g17900.1 | No alias | E3 ubiquitin ligase (PUB) | 0.09 | Archaeplastida | |
Mp8g11800.1 | No alias | E3 ubiquitin ligase (PUB) | 0.04 | Archaeplastida | |
Solyc04g082570.3.1 | No alias | E3 ubiquitin ligase (PUB) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Neighborhood |
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
MF | GO:0016409 | palmitoyltransferase activity | IEP | Neighborhood |
CC | GO:0016592 | mediator complex | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 26 | 100 |
No external refs found! |