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Description : component Pcf11 of Cleavage Factor II (CF-IIm) complex
Gene families : OG0001781 (Archaeplastida) Phylogenetic Tree(s): OG0001781_tree ,
OG_05_0002038 (LandPlants) Phylogenetic Tree(s): OG_05_0002038_tree ,
OG_06_0001962 (SeedPlants) Phylogenetic Tree(s): OG_06_0001962_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e039948_P002 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00040p00210200 | evm_27.TU.AmTr_v1... | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.08 | Archaeplastida | |
| Cpa|evm.model.tig00001628.5 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.02 | Archaeplastida | |
| GSVIVT01012646001 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.11 | Archaeplastida | |
| GSVIVT01033783001 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.11 | Archaeplastida | |
| Gb_21315 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.04 | Archaeplastida | |
| Gb_26268 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.07 | Archaeplastida | |
| LOC_Os08g08830.1 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.09 | Archaeplastida | |
| LOC_Os09g39270.1 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.1 | Archaeplastida | |
| MA_132868g0010 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.05 | Archaeplastida | |
| Mp8g18940.1 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.1 | Archaeplastida | |
| Pp3c16_6360V3.1 | No alias | PCF11P-similar protein 4 | 0.06 | Archaeplastida | |
| Pp3c16_6390V3.1 | No alias | PCF11P-similar protein 4 | 0.09 | Archaeplastida | |
| Solyc09g009120.4.1 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.05 | Archaeplastida | |
| Solyc10g083590.2.1 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.12 | Archaeplastida | |
| Solyc12g094490.2.1 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006479 | protein methylation | IEP | Neighborhood |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016571 | histone methylation | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
| BP | GO:0032259 | methylation | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |