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  5. Zm00001e042499_P001

Zm00001e042499_P001


Description : component psRPS7 of small ribosomal subunit proteome


Gene families : OG0002240 (Archaeplastida) Phylogenetic Tree(s): OG0002240_tree ,
OG_05_0003104 (LandPlants) Phylogenetic Tree(s): OG_05_0003104_tree ,
OG_06_0001925 (SeedPlants) Phylogenetic Tree(s): OG_06_0001925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042499_P001
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02071p00000020 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 Archaeplastida
ATCG00900 RPS7.1, RPS7 Ribosomal protein S7p/S5e family protein 0.13 Archaeplastida
ATCG01240 RPS7.2 ribosomal protein S7 0.13 Archaeplastida
Gb_04094 No alias Ribosomal protein S7, mitochondrial OS=Marchantia... 0.02 Archaeplastida
LOC_Os04g16712.1 No alias component psRPS7 of small ribosomal subunit proteome 0.07 Archaeplastida
LOC_Os04g16798.1 No alias component psRPS7 of small ribosomal subunit proteome 0.07 Archaeplastida
LOC_Os04g16856.1 No alias component psRPS7 of small ribosomal subunit proteome 0.16 Archaeplastida
LOC_Os04g16886.1 No alias component psRPS7 of small ribosomal subunit proteome 0.16 Archaeplastida
LOC_Os07g25002.1 No alias component psRPS7 of small ribosomal subunit proteome 0.16 Archaeplastida
LOC_Os08g15246.1 No alias component psRPS7 of small ribosomal subunit proteome 0.16 Archaeplastida
LOC_Os10g21372.1 No alias component psRPS7 of small ribosomal subunit proteome 0.16 Archaeplastida
LOC_Os12g34045.1 No alias component mtRPS7 of small ribosomal subunit proteome 0.05 Archaeplastida
Zm00001e000926_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 1 150
No external refs found!