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Description : ribonuclease (RNC1)
Gene families : OG0008516 (Archaeplastida) Phylogenetic Tree(s): OG0008516_tree ,
OG_05_0007577 (LandPlants) Phylogenetic Tree(s): OG_05_0007577_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g04540.1 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G37510 | No alias | Ribonuclease III family protein | 0.07 | Archaeplastida | |
| GSVIVT01000148001 | No alias | RNA processing.organelle machineries.RNA... | 0.06 | Archaeplastida | |
| Gb_08430 | No alias | ribonuclease (RNC1) | 0.02 | Archaeplastida | |
| LOC_Os01g59510.1 | No alias | ribonuclease (RNC1) | 0.03 | Archaeplastida | |
| MA_10436489g0010 | No alias | ribonuclease (RNC1) | 0.02 | Archaeplastida | |
| Pp3c5_10700V3.1 | No alias | Ribonuclease III family protein | 0.06 | Archaeplastida | |
| Smo145591 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | Archaeplastida | |
| Solyc10g080040.3.1 | No alias | ribonuclease (RNC1) | 0.15 | Archaeplastida | |
| Zm00001e019511_P001 | No alias | ribonuclease (RNC1) | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Neighborhood |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004832 | valine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| MF | GO:0005542 | folic acid binding | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| CC | GO:0009507 | chloroplast | IEP | Neighborhood |
| CC | GO:0009536 | plastid | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0019842 | vitamin binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0031406 | carboxylic acid binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | Neighborhood |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| MF | GO:0043177 | organic acid binding | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0046164 | alcohol catabolic process | IEP | Neighborhood |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Neighborhood |
| BP | GO:0046174 | polyol catabolic process | IEP | Neighborhood |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | Neighborhood |
| BP | GO:0046434 | organophosphate catabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | Neighborhood |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | Neighborhood |
| MF | GO:0050497 | transferase activity, transferring alkylthio groups | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Neighborhood |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | Neighborhood |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | Neighborhood |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0071949 | FAD binding | IEP | Neighborhood |
| MF | GO:0072341 | modified amino acid binding | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Neighborhood |
| MF | GO:2001070 | starch binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |