Coexpression cluster: Cluster_65 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043039 tRNA aminoacylation 6.34% (13/205) 5.06 0.0 0.0
GO:0043038 amino acid activation 6.34% (13/205) 5.06 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 6.34% (13/205) 5.06 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 6.34% (13/205) 5.06 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 6.34% (13/205) 5.18 0.0 0.0
GO:0140101 catalytic activity, acting on a tRNA 6.34% (13/205) 4.41 0.0 0.0
GO:0006399 tRNA metabolic process 6.34% (13/205) 4.2 0.0 0.0
GO:0016874 ligase activity 6.83% (14/205) 4.0 0.0 0.0
GO:0034660 ncRNA metabolic process 6.83% (14/205) 3.83 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 7.32% (15/205) 3.51 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 17.07% (35/205) 1.94 0.0 0.0
GO:0032555 purine ribonucleotide binding 17.07% (35/205) 1.88 0.0 0.0
GO:0017076 purine nucleotide binding 17.07% (35/205) 1.87 0.0 0.0
GO:0032553 ribonucleotide binding 17.07% (35/205) 1.86 0.0 0.0
GO:0006520 cellular amino acid metabolic process 6.34% (13/205) 3.67 0.0 0.0
GO:0097367 carbohydrate derivative binding 17.07% (35/205) 1.84 0.0 0.0
GO:1901265 nucleoside phosphate binding 17.56% (36/205) 1.76 0.0 0.0
GO:0000166 nucleotide binding 17.56% (36/205) 1.76 0.0 0.0
GO:0036094 small molecule binding 18.05% (37/205) 1.73 0.0 0.0
GO:0043168 anion binding 17.56% (36/205) 1.74 0.0 0.0
GO:0043167 ion binding 21.95% (45/205) 1.4 0.0 0.0
GO:0097159 organic cyclic compound binding 24.39% (50/205) 1.25 0.0 0.0
GO:1901363 heterocyclic compound binding 24.39% (50/205) 1.25 0.0 0.0
GO:0005524 ATP binding 13.66% (28/205) 1.84 0.0 0.0
GO:0008144 drug binding 14.15% (29/205) 1.79 0.0 0.0
GO:0043436 oxoacid metabolic process 6.34% (13/205) 2.94 0.0 0.0
GO:0019752 carboxylic acid metabolic process 6.34% (13/205) 2.94 0.0 0.0
GO:0006082 organic acid metabolic process 6.34% (13/205) 2.94 0.0 0.0
GO:0030554 adenyl nucleotide binding 13.66% (28/205) 1.76 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 13.66% (28/205) 1.76 0.0 0.0
GO:0005488 binding 34.15% (70/205) 0.89 0.0 1e-06
GO:0016070 RNA metabolic process 7.32% (15/205) 2.37 0.0 2e-06
GO:0044281 small molecule metabolic process 6.83% (14/205) 2.33 1e-06 9e-06
GO:0003674 molecular_function 47.8% (98/205) 0.57 2e-06 2e-05
GO:0090304 nucleic acid metabolic process 7.8% (16/205) 1.99 3e-06 3.1e-05
GO:0019898 extrinsic component of membrane 1.95% (4/205) 4.76 1.1e-05 0.000105
GO:0009654 photosystem II oxygen evolving complex 1.95% (4/205) 4.4 3.3e-05 0.000301
GO:0046483 heterocycle metabolic process 8.29% (17/205) 1.62 4.3e-05 0.000378
GO:0006139 nucleobase-containing compound metabolic process 7.8% (16/205) 1.69 4.3e-05 0.00038
GO:0006725 cellular aromatic compound metabolic process 8.29% (17/205) 1.61 4.6e-05 0.000386
GO:1901360 organic cyclic compound metabolic process 8.29% (17/205) 1.57 6.4e-05 0.000533
GO:1901564 organonitrogen compound metabolic process 12.68% (26/205) 1.18 8.4e-05 0.000676
GO:0009523 photosystem II 1.95% (4/205) 4.04 9.1e-05 0.000719
GO:0003676 nucleic acid binding 9.76% (20/205) 1.37 0.000103 0.000792
GO:1990204 oxidoreductase complex 1.95% (4/205) 3.81 0.000175 0.001318
GO:0004222 metalloendopeptidase activity 1.95% (4/205) 3.71 0.000233 0.001716
GO:0003824 catalytic activity 27.32% (56/205) 0.65 0.000249 0.001795
GO:0043170 macromolecule metabolic process 13.66% (28/205) 1.02 0.00027 0.001905
GO:0001882 nucleoside binding 3.41% (7/205) 2.44 0.000317 0.001953
GO:0032549 ribonucleoside binding 3.41% (7/205) 2.44 0.000317 0.001953
GO:0005525 GTP binding 3.41% (7/205) 2.44 0.000317 0.001953
GO:0032550 purine ribonucleoside binding 3.41% (7/205) 2.44 0.000317 0.001953
GO:0032561 guanyl ribonucleotide binding 3.41% (7/205) 2.44 0.000317 0.001953
GO:0001883 purine nucleoside binding 3.41% (7/205) 2.44 0.000317 0.001953
GO:0044238 primary metabolic process 17.07% (35/205) 0.88 0.000294 0.002037
GO:0019001 guanyl nucleotide binding 3.41% (7/205) 2.42 0.00035 0.002118
GO:0071704 organic substance metabolic process 17.56% (36/205) 0.85 0.000364 0.002166
GO:0034641 cellular nitrogen compound metabolic process 8.78% (18/205) 1.3 0.000409 0.002348
GO:0008152 metabolic process 23.41% (48/205) 0.69 0.000404 0.002362
GO:0009521 photosystem 1.95% (4/205) 3.48 0.000436 0.002465
GO:0006508 proteolysis 3.9% (8/205) 2.16 0.000458 0.002502
GO:0008233 peptidase activity 3.9% (8/205) 2.16 0.000458 0.002502
GO:0008237 metallopeptidase activity 1.95% (4/205) 3.4 0.000545 0.002933
GO:0006807 nitrogen compound metabolic process 14.15% (29/205) 0.91 0.000724 0.003833
GO:0015979 photosynthesis 1.95% (4/205) 3.28 0.000742 0.003872
GO:0044436 thylakoid part 1.95% (4/205) 3.24 0.000818 0.004203
GO:0070011 peptidase activity, acting on L-amino acid peptides 3.41% (7/205) 2.03 0.001693 0.008568
GO:0005737 cytoplasm 1.95% (4/205) 2.87 0.002197 0.010951
GO:1902494 catalytic complex 2.44% (5/205) 2.44 0.002289 0.011245
GO:0005509 calcium ion binding 2.44% (5/205) 2.4 0.002654 0.012853
GO:0004175 endopeptidase activity 2.44% (5/205) 2.36 0.00292 0.013942
GO:0003690 double-stranded DNA binding 1.46% (3/205) 3.34 0.003126 0.014717
GO:0003723 RNA binding 3.41% (7/205) 1.8 0.004242 0.019699
GO:0008150 biological_process 28.29% (58/205) 0.47 0.00458 0.020983
GO:0044237 cellular metabolic process 13.66% (28/205) 0.74 0.004962 0.02243
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 1.46% (3/205) 2.87 0.00801 0.035265
GO:0016859 cis-trans isomerase activity 1.46% (3/205) 2.87 0.00801 0.035265
GO:0004817 cysteine-tRNA ligase activity 0.49% (1/205) 6.57 0.010556 0.039323
GO:0006423 cysteinyl-tRNA aminoacylation 0.49% (1/205) 6.57 0.010556 0.039323
GO:0072341 modified amino acid binding 0.49% (1/205) 6.57 0.010556 0.039323
GO:0004832 valine-tRNA ligase activity 0.49% (1/205) 6.57 0.010556 0.039323
GO:0006438 valyl-tRNA aminoacylation 0.49% (1/205) 6.57 0.010556 0.039323
GO:0046422 violaxanthin de-epoxidase activity 0.49% (1/205) 6.57 0.010556 0.039323
GO:0005542 folic acid binding 0.49% (1/205) 6.57 0.010556 0.039323
GO:0004852 uroporphyrinogen-III synthase activity 0.49% (1/205) 6.57 0.010556 0.039323
GO:0015925 galactosidase activity 0.49% (1/205) 6.57 0.010556 0.039323
GO:0004565 beta-galactosidase activity 0.49% (1/205) 6.57 0.010556 0.039323
GO:0009341 beta-galactosidase complex 0.49% (1/205) 6.57 0.010556 0.039323
GO:0004366 glycerol-3-phosphate O-acyltransferase activity 0.49% (1/205) 6.57 0.010556 0.039323
GO:0004820 glycine-tRNA ligase activity 0.49% (1/205) 6.57 0.010556 0.039323
GO:0006426 glycyl-tRNA aminoacylation 0.49% (1/205) 6.57 0.010556 0.039323
GO:0009987 cellular process 14.63% (30/205) 0.6 0.013688 0.049893
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_86 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.058 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_102 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.047 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.098 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_151 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.095 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_186 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_247 0.037 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_119 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.108 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_159 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.044 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_227 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_264 0.036 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_21 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_70 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_75 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_95 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_98 0.04 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.067 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.048 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_135 0.049 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.079 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.053 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.072 Archaeplastida Compare
Zea mays HCCA Cluster_2 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.042 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.091 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.07 Archaeplastida Compare
Zea mays HCCA Cluster_187 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.073 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.065 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_4 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.167 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_129 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.068 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_225 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_245 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.045 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_27 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_88 0.041 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.058 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.066 Archaeplastida Compare
Picea abies HCCA Cluster_292 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_324 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_354 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.061 Archaeplastida Compare
Picea abies HCCA Cluster_446 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.044 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.062 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.046 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.091 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_139 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_243 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.084 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.036 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.05 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_100 0.067 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_103 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.035 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.045 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_150 0.04 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_173 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.054 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_33 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.064 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.078 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.087 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.063 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_271 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_27 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_47 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.094 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.086 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.066 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.065 Archaeplastida Compare
Vitis vinifera HCCA Cluster_176 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.042 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_32 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.087 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.046 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_78 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_85 0.052 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_119 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_129 0.025 Archaeplastida Compare
Sequences (205) (download table)

InterPro Domains

GO Terms

Family Terms