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Description : Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica (sp|q9zts1|sym_orysj : 151.0)
Gene families : OG0001682 (Archaeplastida) Phylogenetic Tree(s): OG0001682_tree ,
OG_05_0007870 (LandPlants) Phylogenetic Tree(s): OG_05_0007870_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g24710.1 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G59980 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.04 | Archaeplastida | |
| Cpa|evm.model.tig00000553.11 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00021070.69 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.03 | Archaeplastida | |
| Cre01.g046652 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.05 | Archaeplastida | |
| Cre08.g364650 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | Archaeplastida | |
| GSVIVT01038277001 | No alias | Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica | 0.05 | Archaeplastida | |
| MA_13806g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Solyc08g015960.3.1 | No alias | Probable methionine--tRNA ligase OS=Oryza sativa subsp.... | 0.06 | Archaeplastida | |
| Zm00001e040540_P001 | No alias | Probable methionine--tRNA ligase OS=Oryza sativa subsp.... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003714 | transcription corepressor activity | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004177 | aminopeptidase activity | IEP | Neighborhood |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| MF | GO:0004366 | glycerol-3-phosphate O-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| MF | GO:0005542 | folic acid binding | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Neighborhood |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Neighborhood |
| CC | GO:0009507 | chloroplast | IEP | Neighborhood |
| CC | GO:0009536 | plastid | IEP | Neighborhood |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0031072 | heat shock protein binding | IEP | Neighborhood |
| MF | GO:0031406 | carboxylic acid binding | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043177 | organic acid binding | IEP | Neighborhood |
| MF | GO:0050497 | transferase activity, transferring alkylthio groups | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| MF | GO:0072341 | modified amino acid binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002547 | tRNA-bd_dom | 101 | 196 |
| No external refs found! |