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  5. Mp2g00420.1

Mp2g00420.1


Description : ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana (sp|f4iae9|y1591_arath : 861.0)


Gene families : OG0001589 (Archaeplastida) Phylogenetic Tree(s): OG0001589_tree ,
OG_05_0005212 (LandPlants) Phylogenetic Tree(s): OG_05_0005212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g00420.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00084950 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein At1g05910... 0.03 Archaeplastida
AT1G05910 No alias cell division cycle protein 48-related / CDC48-related 0.02 Archaeplastida
AT3G15120 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
Cre01.g038151 No alias ATPase family AAA domain-containing protein At1g05910... 0.02 Archaeplastida
GSVIVT01010750001 No alias ATPase family AAA domain-containing protein At1g05910... 0.03 Archaeplastida
GSVIVT01014274001 No alias DNA damage response.BRCA1–BARD1 DNA-damage response... 0.02 Archaeplastida
Gb_05160 No alias ATPase family AAA domain-containing protein At1g05910... 0.03 Archaeplastida
Gb_11471 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.05 Archaeplastida
LOC_Os01g47800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10425878g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10425878g0020 No alias ATPase family AAA domain-containing protein At1g05910... 0.03 Archaeplastida
MA_10432357g0010 No alias ATPase family AAA domain-containing protein At1g05910... 0.08 Archaeplastida
Pp3c23_2940V3.1 No alias cell division cycle protein 48-related / CDC48-related 0.04 Archaeplastida
Pp3c8_5410V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Smo170139 No alias ATPase family AAA domain-containing protein At1g05910... 0.03 Archaeplastida
Solyc04g076180.4.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc07g062770.2.1 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.05 Archaeplastida
Zm00001e020208_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e034695_P003 No alias ATPase family AAA domain-containing protein At1g05910... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR001487 Bromodomain 938 1012
IPR003959 ATPase_AAA_core 435 569
No external refs found!