Coexpression cluster: Cluster_132 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 21.82% (12/55) 2.53 1e-06 0.000162
GO:0005488 binding 45.45% (25/55) 1.3 4e-06 0.000417
GO:0090304 nucleic acid metabolic process 12.73% (7/55) 2.69 9.7e-05 0.004173
GO:1901363 heterocyclic compound binding 29.09% (16/55) 1.5 8.7e-05 0.004686
GO:0097159 organic cyclic compound binding 29.09% (16/55) 1.5 8.7e-05 0.004686
GO:1901360 organic cyclic compound metabolic process 12.73% (7/55) 2.19 0.000798 0.009532
GO:0003677 DNA binding 9.09% (5/55) 2.7 0.001004 0.009807
GO:0097367 carbohydrate derivative binding 16.36% (9/55) 1.77 0.001105 0.009895
GO:0032553 ribonucleotide binding 16.36% (9/55) 1.8 0.00097 0.00993
GO:0051716 cellular response to stimulus 5.45% (3/55) 4.05 0.000792 0.010021
GO:0033554 cellular response to stress 5.45% (3/55) 4.05 0.000792 0.010021
GO:0006974 cellular response to DNA damage stimulus 5.45% (3/55) 4.05 0.000792 0.010021
GO:0017076 purine nucleotide binding 16.36% (9/55) 1.81 0.000933 0.01003
GO:0005524 ATP binding 14.55% (8/55) 1.93 0.001077 0.010066
GO:0032555 purine ribonucleotide binding 16.36% (9/55) 1.82 0.000904 0.010233
GO:0003674 molecular_function 52.73% (29/55) 0.71 0.00124 0.010667
GO:0006725 cellular aromatic compound metabolic process 12.73% (7/55) 2.23 0.000676 0.011187
GO:0046483 heterocycle metabolic process 12.73% (7/55) 2.24 0.000661 0.01185
GO:0008270 zinc ion binding 7.27% (4/55) 3.27 0.000776 0.011921
GO:0030554 adenyl nucleotide binding 14.55% (8/55) 1.85 0.001531 0.012189
GO:0032559 adenyl ribonucleotide binding 14.55% (8/55) 1.85 0.001506 0.012454
GO:0006139 nucleobase-containing compound metabolic process 12.73% (7/55) 2.39 0.00035 0.012549
GO:0035639 purine ribonucleoside triphosphate binding 16.36% (9/55) 1.88 0.000655 0.0128
GO:0008144 drug binding 14.55% (8/55) 1.83 0.001712 0.013145
GO:0006281 DNA repair 5.45% (3/55) 4.17 0.000624 0.013426
GO:1901265 nucleoside phosphate binding 16.36% (9/55) 1.66 0.001945 0.013937
GO:0000166 nucleotide binding 16.36% (9/55) 1.66 0.001945 0.013937
GO:0030983 mismatched DNA binding 3.64% (2/55) 5.76 0.000602 0.014382
GO:0006298 mismatch repair 3.64% (2/55) 5.76 0.000602 0.014382
GO:0043167 ion binding 23.64% (13/55) 1.5 0.000471 0.014471
GO:0043168 anion binding 16.36% (9/55) 1.64 0.002137 0.014819
GO:0005515 protein binding 18.18% (10/55) 1.5 0.002415 0.016223
GO:0036094 small molecule binding 16.36% (9/55) 1.59 0.002684 0.017486
GO:0003690 double-stranded DNA binding 3.64% (2/55) 4.66 0.002839 0.017954
GO:0043170 macromolecule metabolic process 18.18% (10/55) 1.44 0.0033 0.019177
GO:0044451 nucleoplasm part 3.64% (2/55) 4.56 0.003256 0.019443
GO:0034641 cellular nitrogen compound metabolic process 12.73% (7/55) 1.84 0.003248 0.019952
GO:0006259 DNA metabolic process 5.45% (3/55) 3.25 0.003841 0.021733
GO:0008176 tRNA (guanine-N7-)-methyltransferase activity 1.82% (1/55) 7.46 0.005656 0.031181
GO:0006807 nitrogen compound metabolic process 18.18% (10/55) 1.28 0.007225 0.038832
GO:0016070 RNA metabolic process 7.27% (4/55) 2.37 0.007522 0.039444
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 1.82% (1/55) 6.88 0.008472 0.042362
GO:0005672 transcription factor TFIIA complex 1.82% (1/55) 6.88 0.008472 0.042362
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_23 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_224 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.038 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_253 0.035 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_132 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_79 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_223 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_267 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_329 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_256 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_380 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_420 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_492 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_535 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_536 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.054 Archaeplastida Compare
Oryza sativa HCCA Cluster_214 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.034 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_35 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_102 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_141 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_163 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_179 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_219 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_233 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.041 Archaeplastida Compare
Vitis vinifera HCCA Cluster_222 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_246 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_62 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_95 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_133 0.024 Archaeplastida Compare
Sequences (55) (download table)

InterPro Domains

GO Terms

Family Terms