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  5. Mp2g19910.1

Mp2g19910.1


Description : component SPT20/ADA5 of SAGA transcription co-activator complex


Gene families : OG0005278 (Archaeplastida) Phylogenetic Tree(s): OG0005278_tree ,
OG_05_0005424 (LandPlants) Phylogenetic Tree(s): OG_05_0005424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g19910.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G72390 No alias CONTAINS InterPro DOMAIN/s: Spt20 family... 0.03 Archaeplastida
GSVIVT01016716001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
LOC_Os01g02860.1 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.02 Archaeplastida
LOC_Os10g25200.1 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.04 Archaeplastida
MA_10436298g0010 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.04 Archaeplastida
MA_10436398g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_114383g0010 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.02 Archaeplastida
Pp3c13_8340V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c3_3510V3.1 No alias No annotation 0.03 Archaeplastida
Solyc06g063010.4.1 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000124 SAGA complex IEA Interproscan
MF GO:0003712 transcription coregulator activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
CC GO:0030173 integral component of Golgi membrane IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031228 intrinsic component of Golgi membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR021950 Spt20 164 294
No external refs found!