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  5. AT3G62650

AT3G62650


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0007279 (Archaeplastida) Phylogenetic Tree(s): OG0007279_tree ,
OG_05_0005262 (LandPlants) Phylogenetic Tree(s): OG_05_0005262_tree ,
OG_06_0003846 (SeedPlants) Phylogenetic Tree(s): OG_06_0003846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62650
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00113710 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0016925 protein sumoylation RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
BP GO:0000209 protein polyubiquitination IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP Neighborhood
MF GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity IEP Neighborhood
MF GO:0003978 UDP-glucose 4-epimerase activity IEP Neighborhood
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Neighborhood
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004075 biotin carboxylase activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004301 epoxide hydrolase activity IEP Neighborhood
MF GO:0004485 methylcrotonoyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004557 alpha-galactosidase activity IEP Neighborhood
MF GO:0004753 saccharopine dehydrogenase activity IEP Neighborhood
MF GO:0005275 amine transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006012 galactose metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0006551 leucine metabolic process IEP Neighborhood
BP GO:0006552 leucine catabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0006554 lysine catabolic process IEP Neighborhood
BP GO:0006775 fat-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0006816 calcium ion transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
BP GO:0007602 phototransduction IEP Neighborhood
MF GO:0008824 cyanate hydratase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009068 aspartate family amino acid catabolic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009083 branched-chain amino acid catabolic process IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009313 oligosaccharide catabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009439 cyanate metabolic process IEP Neighborhood
BP GO:0009440 cyanate catabolic process IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009585 red, far-red light phototransduction IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009637 response to blue light IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009646 response to absence of light IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009750 response to fructose IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009896 positive regulation of catabolic process IEP Neighborhood
BP GO:0009954 proximal/distal pattern formation IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010189 vitamin E biosynthetic process IEP Neighborhood
BP GO:0010236 plastoquinone biosynthetic process IEP Neighborhood
BP GO:0010268 brassinosteroid homeostasis IEP Neighborhood
BP GO:0010506 regulation of autophagy IEP Neighborhood
BP GO:0010508 positive regulation of autophagy IEP Neighborhood
BP GO:0010555 response to mannitol IEP Neighborhood
BP GO:0010623 programmed cell death involved in cell development IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015908 fatty acid transport IEP Neighborhood
BP GO:0015976 carbon utilization IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
CC GO:0016604 nuclear body IEP Neighborhood
CC GO:0016607 nuclear speck IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Neighborhood
MF GO:0016803 ether hydrolase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019477 L-lysine catabolic process IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
MF GO:0030527 structural constituent of chromatin IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
BP GO:0031331 positive regulation of cellular catabolic process IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0033530 raffinose metabolic process IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0034484 raffinose catabolic process IEP Neighborhood
BP GO:0040020 regulation of meiotic nuclear division IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042282 hydroxymethylglutaryl-CoA reductase activity IEP Neighborhood
BP GO:0042360 vitamin E metabolic process IEP Neighborhood
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043617 cellular response to sucrose starvation IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
BP GO:0045836 positive regulation of meiotic nuclear division IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046369 galactose biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046440 L-lysine metabolic process IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046909 obsolete intermembrane transport IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0047130 saccharopine dehydrogenase (NADP+, L-lysine-forming) activity IEP Neighborhood
BP GO:0048102 autophagic cell death IEP Neighborhood
BP GO:0048657 anther wall tapetum cell differentiation IEP Neighborhood
MF GO:0050373 UDP-arabinose 4-epimerase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051445 regulation of meiotic cell cycle IEP Neighborhood
BP GO:0051446 positive regulation of meiotic cell cycle IEP Neighborhood
BP GO:0051783 regulation of nuclear division IEP Neighborhood
BP GO:0051785 positive regulation of nuclear division IEP Neighborhood
MF GO:0052692 raffinose alpha-galactosidase activity IEP Neighborhood
BP GO:0055088 lipid homeostasis IEP Neighborhood
BP GO:0060147 regulation of posttranscriptional gene silencing IEP Neighborhood
BP GO:0060964 regulation of gene silencing by miRNA IEP Neighborhood
BP GO:0060966 regulation of gene silencing by RNA IEP Neighborhood
BP GO:0060968 regulation of gene silencing IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071483 cellular response to blue light IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090068 positive regulation of cell cycle process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!