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  5. Mp4g13860.1

Mp4g13860.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0005457 (Archaeplastida) Phylogenetic Tree(s): OG0005457_tree ,
OG_05_0005665 (LandPlants) Phylogenetic Tree(s): OG_05_0005665_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g13860.1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G30970 SUF4 zinc finger (C2H2 type) family protein 0.02 Archaeplastida
LOC_Os09g38790.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c19_17160V3.1 No alias zinc finger (C2H2 type) family protein 0.02 Archaeplastida
Solyc02g081620.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e010342_P005 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Neighborhood
MF GO:0001671 ATPase activator activity IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0004000 adenosine deaminase activity IEP Neighborhood
MF GO:0004376 glycolipid mannosyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0051751 alpha-1,4-mannosyltransferase activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!