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  5. Mp4g15080.1

Mp4g15080.1


Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG0000561 (Archaeplastida) Phylogenetic Tree(s): OG0000561_tree ,
OG_05_0000421 (LandPlants) Phylogenetic Tree(s): OG_05_0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g15080.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 Archaeplastida
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.04 Archaeplastida
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.04 Archaeplastida
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.03 Archaeplastida
GSVIVT01008288001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.05 Archaeplastida
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
LOC_Os12g17600.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Archaeplastida
LOC_Os12g19381.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
LOC_Os12g19470.2 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Archaeplastida
MA_47626g0010 No alias small subunit of ribulose-1,5-bisphosphat... 0.07 Archaeplastida
Pp3c12_11880V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.02 Archaeplastida
Pp3c13_15800V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.04 Archaeplastida
Pp3c13_15980V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 Archaeplastida
Pp3c3_12530V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.01 Archaeplastida
Pp3c3_14510V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Archaeplastida
Pp3c3_20140V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 Archaeplastida
Pp3c4_13260V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.02 Archaeplastida
Solyc02g085950.4.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Archaeplastida
Zm00001e009125_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024168_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004820 glycine-tRNA ligase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006426 glycyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008531 riboflavin kinase activity IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000894 RuBisCO_sc_dom 71 179
No external refs found!