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  5. AT4G10560

AT4G10560 (MEE53)


Aliases : MEE53

Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0001960 (Archaeplastida) Phylogenetic Tree(s): OG0001960_tree ,
OG_05_0001279 (LandPlants) Phylogenetic Tree(s): OG_05_0001279_tree ,
OG_06_0000662 (SeedPlants) Phylogenetic Tree(s): OG_06_0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10560
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AT1G29179 No alias BEST Arabidopsis thaliana protein match is:... 0.03 Archaeplastida
AT1G29180 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT1G53340 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT2G02610 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT2G02620 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT2G02680 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT2G02690 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 Archaeplastida
AT2G13895 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT2G28460 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT4G10370 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 Archaeplastida
AT4G13130 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT4G26380 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT5G02360 No alias DC1 domain-containing protein 0.04 Archaeplastida
AT5G03355 No alias No description available 0.11 Archaeplastida
AT5G03360 No alias DC1 domain-containing protein 0.03 Archaeplastida
AT5G55770 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 Archaeplastida
AT5G55780 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0009793 embryo development ending in seed dormancy IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005802 trans-Golgi network IEP Neighborhood
BP GO:0006649 phospholipid transfer to membrane IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008430 selenium binding IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009650 UV protection IEP Neighborhood
BP GO:0009828 plant-type cell wall loosening IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0010411 xyloglucan metabolic process IEP Neighborhood
BP GO:0010500 transmitting tissue development IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0048462 carpel formation IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Neighborhood
BP GO:0071248 cellular response to metal ion IEP Neighborhood
BP GO:0071281 cellular response to iron ion IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
BP GO:2000028 regulation of photoperiodism, flowering IEP Neighborhood
InterPro domains Description Start Stop
IPR004146 DC1 329 377
IPR004146 DC1 531 578
IPR004146 DC1 587 636
IPR004146 DC1 275 319
IPR004146 DC1 413 463
No external refs found!