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  5. AT1G17620

AT1G17620


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG0000075 (Archaeplastida) Phylogenetic Tree(s): OG0000075_tree ,
OG_05_0000224 (LandPlants) Phylogenetic Tree(s): OG_05_0000224_tree ,
OG_06_0001564 (SeedPlants) Phylogenetic Tree(s): OG_06_0001564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G17620
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271600 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00001p00271680 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00010p00185810 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00030p00216100 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00101p00083450 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT1G54540 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Archaeplastida
AT5G06330 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Archaeplastida
AT5G11890 No alias FUNCTIONS IN: molecular_function unknown; LOCATED IN:... 0.04 Archaeplastida
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT5G53730 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01016858001 No alias No description available 0.03 Archaeplastida
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_01957 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_01970 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_41030 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g09880.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os01g39290.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g33550.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os02g44670.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g33990.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os04g58090.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g11010.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g01220.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os09g09460.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g05860.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_180376g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_192947g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_313447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_3589796g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_669170g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_696598g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_740280g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g02160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g19740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c12_2240V3.1 No alias NDR1/HIN1-like 3 0.02 Archaeplastida
Pp3c13_23080V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
Pp3c23_11590V3.1 No alias NDR1/HIN1-like 2 0.04 Archaeplastida
Pp3c3_15720V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
Solyc01g007240.3.1 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g009160.2.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g081450.2.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc03g019920.1.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g121620.1.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc06g074040.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g005040.4.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc10g150145.1.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g068890.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g069970.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g095980.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e008171_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e014749_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e025983_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027782_P001 No alias No annotation 0.06 Archaeplastida
Zm00001e035148_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e039408_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e040847_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e041974_P001 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e041977_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003979 UDP-glucose 6-dehydrogenase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0004779 sulfate adenylyltransferase activity IEP Neighborhood
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006065 UDP-glucuronate biosynthetic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009225 nucleotide-sugar metabolic process IEP Neighborhood
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Neighborhood
BP GO:0009735 response to cytokinin IEP Neighborhood
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010393 galacturonan metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010417 glucuronoxylan biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
BP GO:0032504 multicellular organism reproduction IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042732 D-xylose metabolic process IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
CC GO:0043230 extracellular organelle IEP Neighborhood
BP GO:0043392 negative regulation of DNA binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045488 pectin metabolic process IEP Neighborhood
BP GO:0045489 pectin biosynthetic process IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0046398 UDP-glucuronate metabolic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP Neighborhood
MF GO:0047769 arogenate dehydratase activity IEP Neighborhood
MF GO:0048040 UDP-glucuronate decarboxylase activity IEP Neighborhood
MF GO:0048531 beta-1,3-galactosyltransferase activity IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
MF GO:0050378 UDP-glucuronate 4-epimerase activity IEP Neighborhood
BP GO:0051098 regulation of binding IEP Neighborhood
BP GO:0051100 negative regulation of binding IEP Neighborhood
BP GO:0051101 regulation of DNA binding IEP Neighborhood
BP GO:0052546 cell wall pectin metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
CC GO:0070062 extracellular exosome IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0071241 cellular response to inorganic substance IEP Neighborhood
BP GO:0071248 cellular response to metal ion IEP Neighborhood
BP GO:0071281 cellular response to iron ion IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0090406 pollen tube IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
CC GO:1903561 extracellular vesicle IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 122 228
No external refs found!