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  5. AT1G18070

AT1G18070


Description : Translation elongation factor EF1A/initiation factor IF2gamma family protein


Gene families : OG0000191 (Archaeplastida) Phylogenetic Tree(s): OG0000191_tree ,
OG_05_0005380 (LandPlants) Phylogenetic Tree(s): OG_05_0005380_tree ,
OG_06_0005251 (SeedPlants) Phylogenetic Tree(s): OG_06_0005251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G18070
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Cre06.g284750 No alias Protein biosynthesis.translation termination.eRF3... 0.02 Archaeplastida
GSVIVT01015660001 No alias Elongation factor 1-alpha OS=Daucus carota 0.03 Archaeplastida
Gb_22919 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 Archaeplastida
MA_10430514g0010 No alias No annotation 0.03 Archaeplastida
Mp4g00870.1 No alias EXO9-SUPERKILLER interaction factor (SKI7). GTPase... 0.02 Archaeplastida
Pp3c27_2160V3.1 No alias Translation elongation factor EF1A/initiation factor... 0.05 Archaeplastida
Solyc06g069020.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040640_P002 No alias eRF3 peptide release factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
MF GO:0008135 translation factor activity, RNA binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000741 karyogamy IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0001709 cell fate determination IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004000 adenosine deaminase activity IEP Neighborhood
MF GO:0004004 ATP-dependent RNA helicase activity IEP Neighborhood
MF GO:0004084 branched-chain-amino-acid transaminase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004647 phosphoserine phosphatase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004821 histidine-tRNA ligase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005654 nucleoplasm IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006382 adenosine to inosine editing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006427 histidyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010152 pollen maturation IEP Neighborhood
BP GO:0010197 polar nucleus fusion IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
CC GO:0010369 chromocenter IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
CC GO:0012506 vesicle membrane IEP Neighborhood
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016553 base conversion or substitution editing IEP Neighborhood
CC GO:0016607 nuclear speck IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0016926 protein desumoylation IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
CC GO:0030658 transport vesicle membrane IEP Neighborhood
CC GO:0030659 cytoplasmic vesicle membrane IEP Neighborhood
CC GO:0030660 Golgi-associated vesicle membrane IEP Neighborhood
CC GO:0030662 coated vesicle membrane IEP Neighborhood
CC GO:0030665 clathrin-coated vesicle membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0045694 regulation of embryo sac egg cell differentiation IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048284 organelle fusion IEP Neighborhood
BP GO:0048867 stem cell fate determination IEP Neighborhood
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0070063 RNA polymerase binding IEP Neighborhood
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Neighborhood
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903409 reactive oxygen species biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 416 525
IPR000795 TF_GTP-bd_dom 99 312
IPR004161 EFTu-like_2 343 409
No external refs found!