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  5. Pp3c11_20880V3.1

Pp3c11_20880V3.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG0006794 (Archaeplastida) Phylogenetic Tree(s): OG0006794_tree ,
OG_05_0005562 (LandPlants) Phylogenetic Tree(s): OG_05_0005562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_20880V3.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030622001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 Archaeplastida
LOC_Os06g46890.1 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
MA_1288g0010 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Solyc12g005770.3.1 No alias C3H zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!