Pp3c11_2550V3.1

Description : Zinc-binding ribosomal protein family protein

Gene families : OG0001934 (Archaeplastida) Phylogenetic Tree(s): OG0001934_tree ,
OG_05_0087709 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c11_2550V3.1
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00151080	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	Archaeplastida
AMTR_s00092p00089090	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	Archaeplastida
AT3G60245	No alias	Zinc-binding ribosomal protein family protein	0.44	Archaeplastida
Cpa\|evm.model.tig00000718.64	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.25	Archaeplastida
Cre06.g257150	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.37	Archaeplastida
GSVIVT01013278001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.3	Archaeplastida
GSVIVT01018328001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.35	Archaeplastida
Gb_12624	No alias	component RPL37a of LSU proteome component	0.03	Archaeplastida
Gb_13072	No alias	component RPL37a of LSU proteome component	0.23	Archaeplastida
LOC_Os01g48770.2	No alias	component RPL37a of LSU proteome component	0.12	Archaeplastida
LOC_Os05g48320.1	No alias	component RPL37a of LSU proteome component	0.29	Archaeplastida
MA_158457g0010	No alias	component RPL37a of LSU proteome component	0.08	Archaeplastida
MA_320643g0010	No alias	no hits & (original description: none)	0.19	Archaeplastida
MA_4732g0010	No alias	component RPL37a of LSU proteome component	0.06	Archaeplastida
Mp5g08340.1	No alias	component RPL37a of LSU proteome component	0.03	Archaeplastida
Mp5g09590.1	No alias	component RPL37a of LSU proteome component	0.04	Archaeplastida
Smo227221	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	Archaeplastida
Solyc08g007140.4.1	No alias	component RPL37a of LSU proteome component	0.03	Archaeplastida
Solyc08g077720.3.1	No alias	component RPL37a of LSU proteome component	0.14	Archaeplastida
Zm00001e008395_P001	No alias	component RPL37a of LSU proteome component	0.09	Archaeplastida
Zm00001e013684_P001	No alias	component RPL37a of LSU proteome component	0.3	Archaeplastida
Zm00001e025201_P002	No alias	component RPL37a of LSU proteome component	0.07	Archaeplastida
Zm00001e026482_P001	No alias	component RPL37a of LSU proteome component	0.28	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002674	Ribosomal_L37ae	50	134

External Links

No external refs found!

Pp3c11_2550V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation