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  5. Pp3c12_14910V3.1

Pp3c12_14910V3.1


Description : ADP-ribosylation factor A1E


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_14910V3.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.03 Archaeplastida
AT1G70490 ARFA1D, ATARFA1D Ras-related small GTP-binding family protein 0.04 Archaeplastida
AT2G24765 ATARL1, ARF3, ARL1 ADP-ribosylation factor 3 0.02 Archaeplastida
Cpa|evm.model.tig00001093.2 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Cre12.g535900 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
GSVIVT01013765001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
Gb_00987 No alias ARF-GTPase 0.03 Archaeplastida
Gb_10633 No alias ARF-GTPase 0.02 Archaeplastida
LOC_Os07g12170.1 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os07g12200.1 No alias ARF-GTPase 0.04 Archaeplastida
LOC_Os08g15040.1 No alias ARF-GTPase 0.03 Archaeplastida
MA_167779g0010 No alias ADP-ribosylation factor 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_4349g0020 No alias ARF-GTPase 0.03 Archaeplastida
MA_92857g0020 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp7g13050.1 No alias ARF-GTPase 0.05 Archaeplastida
Mp8g07320.1 No alias ARF-GTPase 0.03 Archaeplastida
Solyc01g100870.3.1 No alias ARF-GTPase 0.02 Archaeplastida
Solyc07g006640.3.1 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e009391_P001 No alias ARF-GTPase 0.06 Archaeplastida
Zm00001e019488_P002 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e025541_P003 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e033127_P003 No alias ARF-GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0035145 exon-exon junction complex IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!