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  5. Pp3c13_2300V3.1

Pp3c13_2300V3.1


Description : methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative


Gene families : OG0002980 (Archaeplastida) Phylogenetic Tree(s): OG0002980_tree ,
OG_05_0003155 (LandPlants) Phylogenetic Tree(s): OG_05_0003155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_2300V3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00023450 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
AT4G13780 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.05 Archaeplastida
Cpa|evm.model.tig00020614.25 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Cre02.g087950 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 Archaeplastida
GSVIVT01020924001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Gb_31125 No alias methionine-tRNA ligase 0.02 Archaeplastida
LOC_Os06g31210.1 No alias methionine-tRNA ligase 0.11 Archaeplastida
MA_10427001g0020 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.04 Archaeplastida
MA_10436199g0010 No alias methionine-tRNA ligase 0.04 Archaeplastida
Mp6g20530.1 No alias methionine-tRNA ligase 0.1 Archaeplastida
Smo164891 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 Archaeplastida
Zm00001e000847_P001 No alias methionine-tRNA ligase 0.03 Archaeplastida
Zm00001e038714_P001 No alias methionine-tRNA ligase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 655 749
IPR015413 Methionyl/Leucyl_tRNA_Synth 27 421
No external refs found!