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  5. Pp3c14_19610V3.1

Pp3c14_19610V3.1


Description : Nucleic acid-binding, OB-fold-like protein


Gene families : OG0003817 (Archaeplastida) Phylogenetic Tree(s): OG0003817_tree ,
OG_05_0003626 (LandPlants) Phylogenetic Tree(s): OG_05_0003626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_19610V3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT3G10090 No alias Nucleic acid-binding, OB-fold-like protein 0.06 Archaeplastida
AT5G03850 No alias Nucleic acid-binding, OB-fold-like protein 0.05 Archaeplastida
AT5G64140 RPS28 ribosomal protein S28 0.1 Archaeplastida
Cpa|evm.model.tig00000194.27 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Cre12.g510450 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.35 Archaeplastida
GSVIVT01033420001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
LOC_Os10g27174.1 No alias component RPS28 of SSU proteome 0.08 Archaeplastida
MA_10206328g0010 No alias component RPS28 of SSU proteome 0.15 Archaeplastida
Mp3g15160.1 No alias component RPS28 of SSU proteome 0.12 Archaeplastida
Smo170205 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
Solyc02g021400.2.1 No alias component RPS28 of SSU proteome 0.06 Archaeplastida
Solyc10g078630.2.1 No alias component RPS28 of SSU proteome 0.05 Archaeplastida
Zm00001e000507_P001 No alias component RPS28 of SSU proteome 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000289 Ribosomal_S28e 5 64
No external refs found!