AT4G18350 (NCED2, ATNCED2)

Aliases : NCED2, ATNCED2

Description : nine-cis-epoxycarotenoid dioxygenase 2

Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0001191 (LandPlants) Phylogenetic Tree(s): OG_05_0001191_tree ,
OG_06_0001076 (SeedPlants) Phylogenetic Tree(s): OG_06_0001076_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18350
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00256600	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00039p00194530	evm_27.TU.AmTr_v1...	Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein	0.03	Archaeplastida
AT1G30100	ATNCED5, NCED5	nine-cis-epoxycarotenoid dioxygenase 5	0.06	Archaeplastida
AT3G14440	NCED3, SIS7,...	nine-cis-epoxycarotenoid dioxygenase 3	0.04	Archaeplastida
GSVIVT01038080001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.13...	0.05	Archaeplastida
Gb_04986	No alias	carotenoid cleavage dioxygenase (CCD4)	0.06	Archaeplastida
Gb_07367	No alias	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.04	Archaeplastida
Gb_14131	No alias	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.03	Archaeplastida
LOC_Os02g47510.1	No alias	carotenoid cleavage dioxygenase (CCD4)	0.03	Archaeplastida
LOC_Os07g05940.1	No alias	neoxanthin cleavage protein	0.04	Archaeplastida
MA_10428396g0010	No alias	carotenoid cleavage dioxygenase (CCD4)	0.03	Archaeplastida
MA_169439g0010	No alias	9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic...	0.02	Archaeplastida
MA_7480666g0010	No alias	No annotation	0.02	Archaeplastida
MA_90573g0010	No alias	carotenoid cleavage dioxygenase (CCD4)	0.03	Archaeplastida
Mp2g07800.1	No alias	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.02	Archaeplastida
Mp3g20700.1	No alias	neoxanthin cleavage protein	0.03	Archaeplastida
Solyc07g056570.1.1	No alias	neoxanthin cleavage protein	0.02	Archaeplastida
Solyc08g016720.1.1	No alias	neoxanthin cleavage protein	0.09	Archaeplastida
Solyc08g075480.4.1	No alias	carotenoid cleavage dioxygenase (CCD4)	0.04	Archaeplastida
Zm00001e032833_P001	No alias	neoxanthin cleavage protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009687	abscisic acid metabolic process	None	Extended
BP	GO:0009688	abscisic acid biosynthetic process	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0010436	carotenoid dioxygenase activity	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016106	sesquiterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043288	apocarotenoid metabolic process	None	Extended
BP	GO:0043289	apocarotenoid biosynthetic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044434	chloroplast part	None	Extended
CC	GO:0044435	plastid part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IDA	Interproscan
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	ISS	Interproscan
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1902644	tertiary alcohol metabolic process	None	Extended
BP	GO:1902645	tertiary alcohol biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	IEP	Neighborhood
MF	GO:0000064	L-ornithine transmembrane transporter activity	IEP	Neighborhood
CC	GO:0000323	lytic vacuole	IEP	Neighborhood
BP	GO:0000738	DNA catabolic process, exonucleolytic	IEP	Neighborhood
MF	GO:0000976	transcription regulatory region sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0001046	core promoter sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0001047	core promoter binding	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
BP	GO:0002215	defense response to nematode	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004520	endodeoxyribonuclease activity	IEP	Neighborhood
MF	GO:0004521	endoribonuclease activity	IEP	Neighborhood
MF	GO:0004536	deoxyribonuclease activity	IEP	Neighborhood
MF	GO:0004540	ribonuclease activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004805	trehalose-phosphatase activity	IEP	Neighborhood
MF	GO:0005290	L-histidine transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005476	carnitine:acyl carnitine antiporter activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006308	DNA catabolic process	IEP	Neighborhood
BP	GO:0006560	proline metabolic process	IEP	Neighborhood
BP	GO:0006561	proline biosynthetic process	IEP	Neighborhood
BP	GO:0006878	cellular copper ion homeostasis	IEP	Neighborhood
BP	GO:0007049	cell cycle	IEP	Neighborhood
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Neighborhood
BP	GO:0007568	aging	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
BP	GO:0008300	isoprenoid catabolic process	IEP	Neighborhood
MF	GO:0008429	phosphatidylethanolamine binding	IEP	Neighborhood
MF	GO:0008506	sucrose:proton symporter activity	IEP	Neighborhood
MF	GO:0008970	phospholipase A1 activity	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0009556	microsporogenesis	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
MF	GO:0009669	sucrose:cation symporter activity	IEP	Neighborhood
BP	GO:0009685	gibberellin metabolic process	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009751	response to salicylic acid	IEP	Neighborhood
BP	GO:0010150	leaf senescence	IEP	Neighborhood
BP	GO:0010152	pollen maturation	IEP	Neighborhood
BP	GO:0010252	auxin homeostasis	IEP	Neighborhood
BP	GO:0010260	animal organ senescence	IEP	Neighborhood
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	Neighborhood
CC	GO:0010282	senescence-associated vacuole	IEP	Neighborhood
BP	GO:0010345	suberin biosynthetic process	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015172	acidic amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015173	aromatic amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015174	basic amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015175	neutral amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015179	L-amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015181	arginine transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015189	L-lysine transmembrane transporter activity	IEP	Neighborhood
BP	GO:0016101	diterpenoid metabolic process	IEP	Neighborhood
BP	GO:0016103	diterpenoid catabolic process	IEP	Neighborhood
BP	GO:0016115	terpenoid catabolic process	IEP	Neighborhood
MF	GO:0016530	metallochaperone activity	IEP	Neighborhood
MF	GO:0016531	copper chaperone activity	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Neighborhood
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
MF	GO:0034256	chlorophyll(ide) b reductase activity	IEP	Neighborhood
BP	GO:0034293	sexual sporulation	IEP	Neighborhood
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0042447	hormone catabolic process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	Neighborhood
MF	GO:0043765	T/G mismatch-specific endonuclease activity	IEP	Neighborhood
BP	GO:0043934	sporulation	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:0045487	gibberellin catabolic process	IEP	Neighborhood
BP	GO:0045490	pectin catabolic process	IEP	Neighborhood
MF	GO:0045543	gibberellin 2-beta-dioxygenase activity	IEP	Neighborhood
BP	GO:0046339	diacylglycerol metabolic process	IEP	Neighborhood
BP	GO:0046340	diacylglycerol catabolic process	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0046461	neutral lipid catabolic process	IEP	Neighborhood
BP	GO:0046462	monoacylglycerol metabolic process	IEP	Neighborhood
BP	GO:0046464	acylglycerol catabolic process	IEP	Neighborhood
BP	GO:0046503	glycerolipid catabolic process	IEP	Neighborhood
BP	GO:0046677	response to antibiotic	IEP	Neighborhood
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0047372	acylglycerol lipase activity	IEP	Neighborhood
BP	GO:0048236	plant-type sporogenesis	IEP	Neighborhood
BP	GO:0048443	stamen development	IEP	Neighborhood
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	Neighborhood
BP	GO:0050829	defense response to Gram-negative bacterium	IEP	Neighborhood
BP	GO:0051321	meiotic cell cycle	IEP	Neighborhood
MF	GO:0052634	C-19 gibberellin 2-beta-dioxygenase activity	IEP	Neighborhood
BP	GO:0052651	monoacylglycerol catabolic process	IEP	Neighborhood
BP	GO:0055070	copper ion homeostasis	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Neighborhood
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	Neighborhood
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	Neighborhood
BP	GO:0080187	floral organ senescence	IEP	Neighborhood
BP	GO:0090693	plant organ senescence	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
MF	GO:1901474	azole transmembrane transporter activity	IEP	Neighborhood
BP	GO:1903046	meiotic cell cycle process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004294	Carotenoid_Oase	121	575

External Links

No external refs found!

AT4G18350 (NCED2, ATNCED2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation