AT4G18770 (AtMYB98, MYB98)

Aliases : AtMYB98, MYB98

Description : myb domain protein 98

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18770
Cluster	HCCA: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272410	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00006p00225600	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00006p00267240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00037p00177500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00096p00076220	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AT3G27785	PGA37, ATMYB118, MYB118	myb domain protein 118	0.03	Archaeplastida
AT5G55020	ATMYB120, MYB120	myb domain protein 120	0.05	Archaeplastida
GSVIVT01007981001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01008303001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01020038001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
GSVIVT01028235001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01031341001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Gb_33428	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g03720.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g07450.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g45090.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os02g02370.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os02g42850.2	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os03g04900.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os03g27090.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os04g38740.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os07g44090.3	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os09g36730.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os11g03440.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os12g03150.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os12g07610.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_10428459g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_492415g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_64405g0010	No alias	transcription factor (MYB)	0.05	Archaeplastida
MA_8846750g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
Mp1g09420.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Pp3c7_23450V3.1	No alias	myb domain protein 106	0.03	Archaeplastida
Solyc03g113530.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc04g077260.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc05g014290.4.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc06g073640.4.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc07g055000.2.1	No alias	transcription factor (MYB)	0.06	Archaeplastida
Solyc10g005760.3.1	No alias	transcription factor (MYB). transcriptional key...	0.03	Archaeplastida
Solyc12g008670.2.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e007904_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e009849_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e011944_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e012156_P001	No alias	No annotation	0.03	Archaeplastida
Zm00001e014925_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e016072_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e019941_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e022280_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e023733_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e030314_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e034214_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e038356_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e041239_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	TAS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006863	purine nucleobase transport	RCA	Interproscan
BP	GO:0006935	chemotaxis	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009553	embryo sac development	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010183	pollen tube guidance	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0015851	nucleobase transport	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040011	locomotion	None	Extended
BP	GO:0042330	taxis	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045697	regulation of synergid differentiation	IMP	Interproscan
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050918	positive chemotaxis	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
MF	GO:0009824	AMP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0052622	ATP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0052623	ADP dimethylallyltransferase activity	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT4G18770 (AtMYB98, MYB98)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation