AT4G20910 (HEN1, CRM2)


Aliases : HEN1, CRM2

Description : double-stranded RNA binding protein-related / DsRBD protein-related


Gene families : OG0004364 (Archaeplastida) Phylogenetic Tree(s): OG0004364_tree ,
OG_05_0004548 (LandPlants) Phylogenetic Tree(s): OG_05_0004548_tree ,
OG_06_0004474 (SeedPlants) Phylogenetic Tree(s): OG_06_0004474_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G20910
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00120100 evm_27.TU.AmTr_v1... RNA biosynthesis.siRNA biogenesis.HEN1 siRNA methyltransferase 0.03 Archaeplastida
GSVIVT01021670001 No alias RNA biosynthesis.siRNA biogenesis.HEN1 siRNA methyltransferase 0.03 Archaeplastida
Pp3c1_60V3.1 No alias double-stranded RNA binding protein-related / DsRBD... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
BP GO:0006342 chromatin silencing RCA Interproscan
BP GO:0007267 cell-cell signaling RCA Interproscan
MF GO:0008173 RNA methyltransferase activity IDA Interproscan
MF GO:0008173 RNA methyltransferase activity IMP Interproscan
BP GO:0009616 virus induced gene silencing IMP Interproscan
BP GO:0009616 virus induced gene silencing RCA Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009886 post-embryonic animal morphogenesis RCA Interproscan
BP GO:0009909 regulation of flower development IMP Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0010014 meristem initiation RCA Interproscan
BP GO:0010051 xylem and phloem pattern formation RCA Interproscan
BP GO:0010093 specification of floral organ identity IMP Interproscan
BP GO:0010267 production of ta-siRNAs involved in RNA interference RCA Interproscan
BP GO:0010305 leaf vascular tissue pattern formation IMP Interproscan
BP GO:0010589 leaf proximal/distal pattern formation IMP Interproscan
BP GO:0016458 gene silencing RCA Interproscan
BP GO:0016569 covalent chromatin modification RCA Interproscan
BP GO:0016570 histone modification RCA Interproscan
BP GO:0030422 production of siRNA involved in RNA interference IMP Interproscan
BP GO:0030422 production of siRNA involved in RNA interference IGI Interproscan
BP GO:0031047 gene silencing by RNA RCA Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IMP Interproscan
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA RCA Interproscan
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA NAS Interproscan
BP GO:0035279 mRNA cleavage involved in gene silencing by miRNA IMP Interproscan
BP GO:0048449 floral organ formation RCA Interproscan
BP GO:0048451 petal formation RCA Interproscan
BP GO:0048453 sepal formation RCA Interproscan
BP GO:0048481 plant ovule development RCA Interproscan
BP GO:0048507 meristem development RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000217 DNA secondary structure binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0000228 nuclear chromosome IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
BP GO:0000281 mitotic cytokinesis IEP Neighborhood
MF GO:0000404 heteroduplex DNA loop binding IEP Neighborhood
BP GO:0000710 meiotic mismatch repair IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004407 histone deacetylase activity IEP Neighborhood
MF GO:0004835 tubulin-tyrosine ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005635 nuclear envelope IEP Neighborhood
CC GO:0005945 6-phosphofructokinase complex IEP Neighborhood
BP GO:0006089 lactate metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
BP GO:0007346 regulation of mitotic cell cycle IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008327 methyl-CpG binding IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
MF GO:0008469 histone-arginine N-methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0009008 DNA-methyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009438 methylglyoxal metabolic process IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009887 animal organ morphogenesis IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010050 vegetative phase change IEP Neighborhood
BP GO:0010069 zygote asymmetric cytokinesis in embryo sac IEP Neighborhood
BP GO:0010070 zygote asymmetric cell division IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
MF GO:0010314 phosphatidylinositol-5-phosphate binding IEP Neighborhood
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP Neighborhood
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP Neighborhood
BP GO:0010425 DNA methylation on cytosine within a CNG sequence IEP Neighborhood
MF GO:0010428 methyl-CpNpG binding IEP Neighborhood
MF GO:0010429 methyl-CpNpN binding IEP Neighborhood
CC GO:0010445 nuclear dicing body IEP Neighborhood
BP GO:0010528 regulation of transposition IEP Neighborhood
BP GO:0010529 negative regulation of transposition IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0016273 arginine N-methyltransferase activity IEP Neighborhood
MF GO:0016274 protein-arginine N-methyltransferase activity IEP Neighborhood
MF GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018195 peptidyl-arginine modification IEP Neighborhood
BP GO:0018216 peptidyl-arginine methylation IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP Neighborhood
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP Neighborhood
BP GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031054 pre-miRNA processing IEP Neighborhood
BP GO:0031935 regulation of chromatin silencing IEP Neighborhood
BP GO:0031937 positive regulation of chromatin silencing IEP Neighborhood
MF GO:0032135 DNA insertion or deletion binding IEP Neighborhood
CC GO:0032300 mismatch repair complex IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032776 DNA methylation on cytosine IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0033233 regulation of protein sumoylation IEP Neighborhood
BP GO:0033234 negative regulation of protein sumoylation IEP Neighborhood
MF GO:0033558 protein deacetylase activity IEP Neighborhood
MF GO:0034046 poly(G) binding IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034969 histone arginine methylation IEP Neighborhood
BP GO:0034970 histone H3-R2 methylation IEP Neighborhood
BP GO:0034971 histone H3-R17 methylation IEP Neighborhood
BP GO:0034972 histone H3-R26 methylation IEP Neighborhood
MF GO:0035197 siRNA binding IEP Neighborhood
MF GO:0035198 miRNA binding IEP Neighborhood
MF GO:0035241 protein-arginine omega-N monomethyltransferase activity IEP Neighborhood
MF GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity IEP Neighborhood
BP GO:0035246 peptidyl-arginine N-methylation IEP Neighborhood
BP GO:0035247 peptidyl-arginine omega-N-methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042182 ketone catabolic process IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0042991 obsolete transcription factor import into nucleus IEP Neighborhood
MF GO:0043138 3'-5' DNA helicase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043570 maintenance of DNA repeat elements IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
BP GO:0046185 aldehyde catabolic process IEP Neighborhood
MF GO:0046982 protein heterodimerization activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048497 maintenance of floral organ identity IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051093 negative regulation of developmental process IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051568 histone H3-K4 methylation IEP Neighborhood
BP GO:0051596 methylglyoxal catabolic process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0060968 regulation of gene silencing IEP Neighborhood
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
BP GO:0061727 methylglyoxal catabolic process to lactate IEP Neighborhood
MF GO:0061980 regulatory RNA binding IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
MF GO:0070717 poly-purine tract binding IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
BP GO:0090308 regulation of methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0090309 positive regulation of methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0090700 maintenance of plant organ identity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
BP GO:1901987 regulation of cell cycle phase transition IEP Neighborhood
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Neighborhood
BP GO:1902275 regulation of chromatin organization IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903320 regulation of protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:1903321 negative regulation of protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:1905269 positive regulation of chromatin organization IEP Neighborhood
CC GO:1990391 DNA repair complex IEP Neighborhood
BP GO:2001252 positive regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR025714 Methyltranfer_dom 712 832
No external refs found!