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  5. Pp3c17_15800V3.1

Pp3c17_15800V3.1


Description : Histone superfamily protein


Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree ,
OG_05_0000249 (LandPlants) Phylogenetic Tree(s): OG_05_0000249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_15800V3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00228620 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
AMTR_s00012p00067980 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
AMTR_s00012p00085300 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
AT3G46030 HTB11 Histone superfamily protein 0.02 Archaeplastida
Cre06.g264900 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre06.g274250 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre06.g275800 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre06.g276550 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre06.g276900 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre12.g504700 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre12.g505600 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre12.g506200 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre13.g570050 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre17.g709150 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre17.g710450 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre17.g711750 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre17.g713450 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre17.g714050 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Gb_26315 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os01g05630.1 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os03g17084.1 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os05g49860.1 No alias histone (H2B) 0.02 Archaeplastida
MA_10435143g0010 No alias histone (H2B) 0.02 Archaeplastida
MA_10435143g0020 No alias histone (H2B) 0.02 Archaeplastida
MA_6078786g0010 No alias histone (H2B) 0.02 Archaeplastida
MA_9293473g0010 No alias histone (H2B) 0.03 Archaeplastida
Mp6g04070.1 No alias histone (H2B) 0.02 Archaeplastida
Smo182308 No alias Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
Solyc05g055440.1.1 No alias histone (H2B) 0.02 Archaeplastida
Solyc06g074780.1.1 No alias histone (H2B) 0.02 Archaeplastida
Solyc06g074790.2.1 No alias histone (H2B) 0.04 Archaeplastida
Solyc06g075800.1.1 No alias histone (H2B) 0.03 Archaeplastida
Solyc12g011455.1.1 No alias histone (H2B) 0.04 Archaeplastida
Zm00001e016882_P001 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e023342_P001 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e027803_P001 No alias histone (H2B) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!