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  5. Pp3c17_18640V3.1

Pp3c17_18640V3.1


Description : MIF4G domain-containing protein / MA3 domain-containing protein


Gene families : OG0000590 (Archaeplastida) Phylogenetic Tree(s): OG0000590_tree ,
OG_05_0001492 (LandPlants) Phylogenetic Tree(s): OG_05_0001492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_18640V3.1
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00140630 evm_27.TU.AmTr_v1... Protein biosynthesis.translation initiation.mRNA... 0.02 Archaeplastida
Cpa|evm.model.tig00021350.5 No alias Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.02 Archaeplastida
Cre17.g696250 No alias Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.02 Archaeplastida
GSVIVT01023638001 No alias Protein biosynthesis.translation initiation.mRNA... 0.04 Archaeplastida
Pp3c17_18440V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.04 Archaeplastida
Solyc12g009960.2.1 No alias component eIF-iso4G of eIF-iso4F unwinding complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 243 467
IPR003891 Initiation_fac_eIF4g_MI 687 795
No external refs found!