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Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink).
Gene families : OG0006562 (Archaeplastida) Phylogenetic Tree(s): OG0006562_tree ,
OG_05_0005254 (LandPlants) Phylogenetic Tree(s): OG_05_0005254_tree ,
OG_06_0004937 (SeedPlants) Phylogenetic Tree(s): OG_06_0004937_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G22320 | |
| Cluster | HCCA: Cluster_23 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000795 | synaptonemal complex | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
| MF | GO:0004004 | ATP-dependent RNA helicase activity | IEP | Neighborhood |
| CC | GO:0005778 | peroxisomal membrane | IEP | Neighborhood |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0006997 | nucleus organization | IEP | Neighborhood |
| BP | GO:0007005 | mitochondrion organization | IEP | Neighborhood |
| BP | GO:0007129 | synapsis | IEP | Neighborhood |
| BP | GO:0007131 | reciprocal meiotic recombination | IEP | Neighborhood |
| MF | GO:0008186 | RNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008312 | 7S RNA binding | IEP | Neighborhood |
| CC | GO:0009504 | cell plate | IEP | Neighborhood |
| BP | GO:0009560 | embryo sac egg cell differentiation | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Neighborhood |
| MF | GO:0016783 | sulfurtransferase activity | IEP | Neighborhood |
| BP | GO:0018023 | peptidyl-lysine trimethylation | IEP | Neighborhood |
| BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
| BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| CC | GO:0030118 | clathrin coat | IEP | Neighborhood |
| CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Neighborhood |
| BP | GO:0030154 | cell differentiation | IEP | Neighborhood |
| MF | GO:0031071 | cysteine desulfurase activity | IEP | Neighborhood |
| MF | GO:0031490 | chromatin DNA binding | IEP | Neighborhood |
| CC | GO:0031903 | microbody membrane | IEP | Neighborhood |
| CC | GO:0034708 | methyltransferase complex | IEP | Neighborhood |
| CC | GO:0035097 | histone methyltransferase complex | IEP | Neighborhood |
| BP | GO:0035825 | homologous recombination | IEP | Neighborhood |
| BP | GO:0042991 | obsolete transcription factor import into nucleus | IEP | Neighborhood |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044438 | microbody part | IEP | Neighborhood |
| CC | GO:0044439 | peroxisomal part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| CC | GO:0048188 | Set1C/COMPASS complex | IEP | Neighborhood |
| CC | GO:0048500 | signal recognition particle | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051568 | histone H3-K4 methylation | IEP | Neighborhood |
| BP | GO:0060776 | simple leaf morphogenesis | IEP | Neighborhood |
| BP | GO:0070085 | glycosylation | IEP | Neighborhood |
| BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | Neighborhood |
| BP | GO:0080182 | histone H3-K4 trimethylation | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| CC | GO:0099086 | synaptonemal structure | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1903046 | meiotic cell cycle process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |