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  5. Pp3c18_12300V3.1

Pp3c18_12300V3.1


Description : Histone superfamily protein


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_12300V3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Gb_19428 No alias histone (H3) 0.01 Archaeplastida
Gb_30564 No alias histone (H3) 0.01 Archaeplastida
Gb_36661 No alias histone (H3) 0.01 Archaeplastida
MA_125055g0020 No alias Histone H3.2 OS=Cichorium intybus (sp|q5mya4|h32_cicin : 122.0) 0.01 Archaeplastida
MA_222556g0010 No alias Histone H3.2 OS=Lilium longiflorum (sp|q402e1|h32_lillo : 116.0) 0.01 Archaeplastida
MA_24261g0010 No alias histone (H3) 0.02 Archaeplastida
MA_356208g0010 No alias histone (H3) 0.01 Archaeplastida
Mp3g11410.1 No alias histone (H3) 0.02 Archaeplastida
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.02 Archaeplastida
Solyc04g081145.1.1 No alias histone (H3) 0.01 Archaeplastida
Zm00001e008160_P001 No alias histone (H3) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!