| BP | GO:0000003 | reproduction | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Neighborhood |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0000278 | mitotic cell cycle | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| BP | GO:0000712 | resolution of meiotic recombination intermediates | IEP | Neighborhood |
| BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Neighborhood |
| BP | GO:0000725 | recombinational repair | IEP | Neighborhood |
| BP | GO:0000741 | karyogamy | IEP | Neighborhood |
| CC | GO:0000775 | chromosome, centromeric region | IEP | Neighborhood |
| BP | GO:0000904 | cell morphogenesis involved in differentiation | IEP | Neighborhood |
| BP | GO:0000911 | cytokinesis by cell plate formation | IEP | Neighborhood |
| CC | GO:0000930 | gamma-tubulin complex | IEP | Neighborhood |
| CC | GO:0000932 | P-body | IEP | Neighborhood |
| BP | GO:0002252 | immune effector process | IEP | Neighborhood |
| BP | GO:0002376 | immune system process | IEP | Neighborhood |
| BP | GO:0003006 | developmental process involved in reproduction | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004839 | ubiquitin activating enzyme activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005635 | nuclear envelope | IEP | Neighborhood |
| CC | GO:0005819 | spindle | IEP | Neighborhood |
| CC | GO:0005829 | cytosol | IEP | Neighborhood |
| CC | GO:0005911 | cell-cell junction | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006261 | DNA-dependent DNA replication | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006270 | DNA replication initiation | IEP | Neighborhood |
| BP | GO:0006275 | regulation of DNA replication | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006304 | DNA modification | IEP | Neighborhood |
| BP | GO:0006305 | DNA alkylation | IEP | Neighborhood |
| BP | GO:0006306 | DNA methylation | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006312 | mitotic recombination | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006333 | chromatin assembly or disassembly | IEP | Neighborhood |
| BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
| BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
| BP | GO:0006342 | chromatin silencing | IEP | Neighborhood |
| BP | GO:0006346 | methylation-dependent chromatin silencing | IEP | Neighborhood |
| BP | GO:0006349 | regulation of gene expression by genetic imprinting | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Neighborhood |
| BP | GO:0006379 | mRNA cleavage | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006476 | protein deacetylation | IEP | Neighborhood |
| BP | GO:0006479 | protein methylation | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006513 | protein monoubiquitination | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| BP | GO:0006606 | protein import into nucleus | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006952 | defense response | IEP | Neighborhood |
| BP | GO:0006955 | immune response | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0007015 | actin filament organization | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007049 | cell cycle | IEP | Neighborhood |
| BP | GO:0007059 | chromosome segregation | IEP | Neighborhood |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Neighborhood |
| BP | GO:0007129 | synapsis | IEP | Neighborhood |
| BP | GO:0007131 | reciprocal meiotic recombination | IEP | Neighborhood |
| BP | GO:0007155 | cell adhesion | IEP | Neighborhood |
| BP | GO:0007267 | cell-cell signaling | IEP | Neighborhood |
| BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Neighborhood |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
| MF | GO:0008131 | primary amine oxidase activity | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
| CC | GO:0008278 | cohesin complex | IEP | Neighborhood |
| BP | GO:0008283 | cell proliferation | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009409 | response to cold | IEP | Neighborhood |
| CC | GO:0009506 | plasmodesma | IEP | Neighborhood |
| BP | GO:0009560 | embryo sac egg cell differentiation | IEP | Neighborhood |
| CC | GO:0009574 | preprophase band | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009606 | tropism | IEP | Neighborhood |
| BP | GO:0009607 | response to biotic stimulus | IEP | Neighborhood |
| BP | GO:0009615 | response to virus | IEP | Neighborhood |
| BP | GO:0009616 | virus induced gene silencing | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009629 | response to gravity | IEP | Neighborhood |
| BP | GO:0009630 | gravitropism | IEP | Neighborhood |
| BP | GO:0009639 | response to red or far red light | IEP | Neighborhood |
| BP | GO:0009640 | photomorphogenesis | IEP | Neighborhood |
| BP | GO:0009653 | anatomical structure morphogenesis | IEP | Neighborhood |
| BP | GO:0009756 | carbohydrate mediated signaling | IEP | Neighborhood |
| BP | GO:0009790 | embryo development | IEP | Neighborhood |
| BP | GO:0009791 | post-embryonic development | IEP | Neighborhood |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Neighborhood |
| BP | GO:0009845 | seed germination | IEP | Neighborhood |
| BP | GO:0009887 | animal organ morphogenesis | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Neighborhood |
| CC | GO:0009898 | cytoplasmic side of plasma membrane | IEP | Neighborhood |
| BP | GO:0009909 | regulation of flower development | IEP | Neighborhood |
| BP | GO:0009910 | negative regulation of flower development | IEP | Neighborhood |
| BP | GO:0009933 | meristem structural organization | IEP | Neighborhood |
| BP | GO:0010048 | vernalization response | IEP | Neighborhood |
| BP | GO:0010050 | vegetative phase change | IEP | Neighborhood |
| BP | GO:0010090 | trichome morphogenesis | IEP | Neighborhood |
| BP | GO:0010162 | seed dormancy process | IEP | Neighborhood |
| BP | GO:0010165 | response to X-ray | IEP | Neighborhood |
| BP | GO:0010182 | sugar mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0010212 | response to ionizing radiation | IEP | Neighborhood |
| BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | Neighborhood |
| BP | GO:0010229 | inflorescence development | IEP | Neighborhood |
| BP | GO:0010267 | production of ta-siRNAs involved in RNA interference | IEP | Neighborhood |
| BP | GO:0010332 | response to gamma radiation | IEP | Neighborhood |
| BP | GO:0010389 | regulation of G2/M transition of mitotic cell cycle | IEP | Neighborhood |
| BP | GO:0010390 | histone monoubiquitination | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Neighborhood |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010638 | positive regulation of organelle organization | IEP | Neighborhood |
| MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016233 | telomere capping | IEP | Neighborhood |
| BP | GO:0016246 | RNA interference | IEP | Neighborhood |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
| CC | GO:0016363 | nuclear matrix | IEP | Neighborhood |
| BP | GO:0016441 | posttranscriptional gene silencing | IEP | Neighborhood |
| BP | GO:0016444 | somatic cell DNA recombination | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| CC | GO:0016514 | SWI/SNF complex | IEP | Neighborhood |
| BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016571 | histone methylation | IEP | Neighborhood |
| BP | GO:0016574 | histone ubiquitination | IEP | Neighborhood |
| BP | GO:0016575 | histone deacetylation | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| BP | GO:0016926 | protein desumoylation | IEP | Neighborhood |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0017038 | protein import | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019287 | isopentenyl diphosphate biosynthetic process, mevalonate pathway | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| BP | GO:0019827 | stem cell population maintenance | IEP | Neighborhood |
| BP | GO:0019915 | lipid storage | IEP | Neighborhood |
| BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
| BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0022610 | biological adhesion | IEP | Neighborhood |
| BP | GO:0022611 | dormancy process | IEP | Neighborhood |
| BP | GO:0023052 | signaling | IEP | Neighborhood |
| CC | GO:0030054 | cell junction | IEP | Neighborhood |
| BP | GO:0030154 | cell differentiation | IEP | Neighborhood |
| BP | GO:0030422 | production of siRNA involved in RNA interference | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0030832 | regulation of actin filament length | IEP | Neighborhood |
| BP | GO:0030833 | regulation of actin filament polymerization | IEP | Neighborhood |
| BP | GO:0030838 | positive regulation of actin filament polymerization | IEP | Neighborhood |
| CC | GO:0030870 | Mre11 complex | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| BP | GO:0031048 | chromatin silencing by small RNA | IEP | Neighborhood |
| BP | GO:0031050 | dsRNA fragmentation | IEP | Neighborhood |
| BP | GO:0031056 | regulation of histone modification | IEP | Neighborhood |
| BP | GO:0031060 | regulation of histone methylation | IEP | Neighborhood |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Neighborhood |
| CC | GO:0031209 | SCAR complex | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031334 | positive regulation of protein complex assembly | IEP | Neighborhood |
| MF | GO:0031490 | chromatin DNA binding | IEP | Neighborhood |
| BP | GO:0031497 | chromatin assembly | IEP | Neighborhood |
| BP | GO:0031507 | heterochromatin assembly | IEP | Neighborhood |
| BP | GO:0031935 | regulation of chromatin silencing | IEP | Neighborhood |
| CC | GO:0031965 | nuclear membrane | IEP | Neighborhood |
| BP | GO:0032200 | telomere organization | IEP | Neighborhood |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | Neighborhood |
| BP | GO:0032259 | methylation | IEP | Neighborhood |
| BP | GO:0032271 | regulation of protein polymerization | IEP | Neighborhood |
| BP | GO:0032273 | positive regulation of protein polymerization | IEP | Neighborhood |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
| BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| BP | GO:0032506 | cytokinetic process | IEP | Neighborhood |
| BP | GO:0032535 | regulation of cellular component size | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0032970 | regulation of actin filament-based process | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0033043 | regulation of organelle organization | IEP | Neighborhood |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Neighborhood |
| CC | GO:0033186 | CAF-1 complex | IEP | Neighborhood |
| BP | GO:0033233 | regulation of protein sumoylation | IEP | Neighborhood |
| BP | GO:0033234 | negative regulation of protein sumoylation | IEP | Neighborhood |
| BP | GO:0033523 | histone H2B ubiquitination | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| MF | GO:0034046 | poly(G) binding | IEP | Neighborhood |
| BP | GO:0034504 | protein localization to nucleus | IEP | Neighborhood |
| BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
| BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
| BP | GO:0035194 | posttranscriptional gene silencing by RNA | IEP | Neighborhood |
| BP | GO:0035196 | production of miRNAs involved in gene silencing by miRNA | IEP | Neighborhood |
| BP | GO:0035601 | protein deacylation | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| CC | GO:0035770 | ribonucleoprotein granule | IEP | Neighborhood |
| BP | GO:0035821 | modification of morphology or physiology of other organism | IEP | Neighborhood |
| BP | GO:0035825 | homologous recombination | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
| CC | GO:0036464 | cytoplasmic ribonucleoprotein granule | IEP | Neighborhood |
| BP | GO:0040029 | regulation of gene expression, epigenetic | IEP | Neighborhood |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
| BP | GO:0042138 | meiotic DNA double-strand break formation | IEP | Neighborhood |
| BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
| MF | GO:0042800 | histone methyltransferase activity (H3-K4 specific) | IEP | Neighborhood |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Neighborhood |
| BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | Neighborhood |
| BP | GO:0043254 | regulation of protein complex assembly | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
| BP | GO:0043631 | RNA polyadenylation | IEP | Neighborhood |
| BP | GO:0043687 | post-translational protein modification | IEP | Neighborhood |
| BP | GO:0044003 | modification by symbiont of host morphology or physiology | IEP | Neighborhood |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044419 | interspecies interaction between organisms | IEP | Neighborhood |
| CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood |
| CC | GO:0044450 | microtubule organizing center part | IEP | Neighborhood |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | Neighborhood |
| BP | GO:0045010 | actin nucleation | IEP | Neighborhood |
| BP | GO:0045087 | innate immune response | IEP | Neighborhood |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | Neighborhood |
| BP | GO:0045787 | positive regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | Neighborhood |
| BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0047484 | regulation of response to osmotic stress | IEP | Neighborhood |
| BP | GO:0048284 | organelle fusion | IEP | Neighborhood |
| BP | GO:0048364 | root development | IEP | Neighborhood |
| BP | GO:0048366 | leaf development | IEP | Neighborhood |
| BP | GO:0048367 | shoot system development | IEP | Neighborhood |
| BP | GO:0048449 | floral organ formation | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
| BP | GO:0048532 | anatomical structure arrangement | IEP | Neighborhood |
| BP | GO:0048580 | regulation of post-embryonic development | IEP | Neighborhood |
| BP | GO:0048581 | negative regulation of post-embryonic development | IEP | Neighborhood |
| BP | GO:0048608 | reproductive structure development | IEP | Neighborhood |
| BP | GO:0048609 | multicellular organismal reproductive process | IEP | Neighborhood |
| BP | GO:0048645 | animal organ formation | IEP | Neighborhood |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | Neighborhood |
| BP | GO:0048731 | system development | IEP | Neighborhood |
| BP | GO:0048825 | cotyledon development | IEP | Neighborhood |
| BP | GO:0048827 | phyllome development | IEP | Neighborhood |
| BP | GO:0048831 | regulation of shoot system development | IEP | Neighborhood |
| BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
| BP | GO:0048869 | cellular developmental process | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0050793 | regulation of developmental process | IEP | Neighborhood |
| BP | GO:0050826 | response to freezing | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Neighborhood |
| BP | GO:0051093 | negative regulation of developmental process | IEP | Neighborhood |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051170 | import into nucleus | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051235 | maintenance of location | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Neighborhood |
| BP | GO:0051241 | negative regulation of multicellular organismal process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0051567 | histone H3-K9 methylation | IEP | Neighborhood |
| BP | GO:0051568 | histone H3-K4 methylation | IEP | Neighborhood |
| BP | GO:0051570 | regulation of histone H3-K9 methylation | IEP | Neighborhood |
| BP | GO:0051607 | defense response to virus | IEP | Neighborhood |
| BP | GO:0051701 | interaction with host | IEP | Neighborhood |
| BP | GO:0051704 | multi-organism process | IEP | Neighborhood |
| BP | GO:0051707 | response to other organism | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| BP | GO:0051817 | modification of morphology or physiology of other organism involved in symbiotic interaction | IEP | Neighborhood |
| BP | GO:0052018 | modulation by symbiont of RNA levels in host | IEP | Neighborhood |
| BP | GO:0052249 | modulation of RNA levels in other organism involved in symbiotic interaction | IEP | Neighborhood |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
| BP | GO:0060968 | regulation of gene silencing | IEP | Neighborhood |
| BP | GO:0061647 | histone H3-K9 modification | IEP | Neighborhood |
| BP | GO:0061982 | meiosis I cell cycle process | IEP | Neighborhood |
| BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | Neighborhood |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Neighborhood |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| MF | GO:0070717 | poly-purine tract binding | IEP | Neighborhood |
| BP | GO:0070828 | heterochromatin organization | IEP | Neighborhood |
| BP | GO:0070918 | production of small RNA involved in gene silencing by RNA | IEP | Neighborhood |
| BP | GO:0071514 | genetic imprinting | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:0080188 | RNA-directed DNA methylation | IEP | Neighborhood |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | Neighborhood |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Neighborhood |
| BP | GO:0090567 | reproductive shoot system development | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Neighborhood |
| BP | GO:0098542 | defense response to other organism | IEP | Neighborhood |
| CC | GO:0098552 | side of membrane | IEP | Neighborhood |
| CC | GO:0098562 | cytoplasmic side of membrane | IEP | Neighborhood |
| BP | GO:0098586 | cellular response to virus | IEP | Neighborhood |
| CC | GO:0098687 | chromosomal region | IEP | Neighborhood |
| BP | GO:0098727 | maintenance of cell number | IEP | Neighborhood |
| BP | GO:0098732 | macromolecule deacylation | IEP | Neighborhood |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | Neighborhood |
| BP | GO:0099402 | plant organ development | IEP | Neighborhood |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
| BP | GO:0110053 | regulation of actin filament organization | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| BP | GO:1901000 | regulation of response to salt stress | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Neighborhood |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Neighborhood |
| BP | GO:1902410 | mitotic cytokinetic process | IEP | Neighborhood |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1902749 | regulation of cell cycle G2/M phase transition | IEP | Neighborhood |
| BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Neighborhood |
| BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Neighborhood |
| BP | GO:1903046 | meiotic cell cycle process | IEP | Neighborhood |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Neighborhood |
| BP | GO:1903320 | regulation of protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:1903321 | negative regulation of protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| CC | GO:1904949 | ATPase complex | IEP | Neighborhood |
| BP | GO:1905393 | plant organ formation | IEP | Neighborhood |
| BP | GO:2000023 | regulation of lateral root development | IEP | Neighborhood |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Neighborhood |
| BP | GO:2000069 | regulation of post-embryonic root development | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2000241 | regulation of reproductive process | IEP | Neighborhood |
| BP | GO:2000242 | negative regulation of reproductive process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |