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  5. AT4G23520

AT4G23520


Description : Cysteine proteinases superfamily protein


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0019947 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G23520
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00249780 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AMTR_s00016p00253110 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.06 Archaeplastida
AMTR_s00021p00178750 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AMTR_s00049p00133800 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.06 Archaeplastida
AMTR_s00374p00005120 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AMTR_s01332p00008900 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AT1G06260 No alias Cysteine proteinases superfamily protein 0.04 Archaeplastida
AT1G29080 No alias Papain family cysteine protease 0.03 Archaeplastida
AT1G29090 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT2G34080 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT3G48350 No alias Cysteine proteinases superfamily protein 0.05 Archaeplastida
AT4G36880 CP1 cysteine proteinase1 0.04 Archaeplastida
GSVIVT01007585001 No alias Protein degradation.peptidase families.cysteine-type... 0.05 Archaeplastida
GSVIVT01020657001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021223001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_10444 No alias protease (Papain) 0.02 Archaeplastida
LOC_Os04g12660.1 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 Archaeplastida
LOC_Os04g13090.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os05g01810.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 Archaeplastida
LOC_Os08g44270.1 No alias protease (Papain) 0.04 Archaeplastida
LOC_Os09g32230.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
LOC_Os12g17540.1 No alias protease (Papain) 0.03 Archaeplastida
MA_103463g0010 No alias Vignain OS=Vigna mungo (sp|p12412|cysep_vigmu : 408.0) &... 0.02 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10433090g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_210951g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_34759g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.03 Archaeplastida
Smo139792 No alias Caricain OS=Carica papaya 0.02 Archaeplastida
Solyc02g076980.5.1.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
Solyc02g077040.4.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
Solyc12g094700.3.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e010091_P001 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
Zm00001e021376_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006508 proteolysis ISS Interproscan
MF GO:0008234 cysteine-type peptidase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
CC GO:0043076 megasporocyte nucleus IEP Neighborhood
CC GO:0043078 polar nucleus IEP Neighborhood
BP GO:0048317 seed morphogenesis IEP Neighborhood
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0070529 L-tryptophan aminotransferase activity IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0080022 primary root development IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP Neighborhood
BP GO:0080113 regulation of seed growth IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:2000014 regulation of endosperm development IEP Neighborhood
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 133 349
IPR013201 Prot_inhib_I29 47 104
No external refs found!