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  5. Pp3c19_5830V3.1

Pp3c19_5830V3.1


Description : Transport protein particle (TRAPP) component


Gene families : OG0006270 (Archaeplastida) Phylogenetic Tree(s): OG0006270_tree ,
OG_05_0007656 (LandPlants) Phylogenetic Tree(s): OG_05_0007656_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_5830V3.1
Cluster HCCA: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
AT5G58030 No alias Transport protein particle (TRAPP) component 0.04 Archaeplastida
Cpa|evm.model.tig00020961.101 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.01 Archaeplastida
GSVIVT01023596001 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.02 Archaeplastida
LOC_Os01g51220.1 No alias component TRS31 of TRAPP-I/II/III complex-shared components 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0034998 oligosaccharyltransferase I complex IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!