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  5. Pp3c1_26350V3.1

Pp3c1_26350V3.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG0002462 (Archaeplastida) Phylogenetic Tree(s): OG0002462_tree ,
OG_05_0004901 (LandPlants) Phylogenetic Tree(s): OG_05_0004901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_26350V3.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT5G05570 No alias transducin family protein / WD-40 repeat family protein 0.05 Archaeplastida
Cre12.g558250 No alias No description available 0.01 Archaeplastida
GSVIVT01032802001 No alias No description available 0.05 Archaeplastida
LOC_Os04g47700.1 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_1162212g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_40641g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5934752g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7753240g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8863348g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp8g09160.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Smo413341 No alias No description available 0.04 Archaeplastida
Solyc09g005600.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!