Pp3c1_28780V3.1

Description : Ribosomal protein S19e family protein

Gene families : OG0002393 (Archaeplastida) Phylogenetic Tree(s): OG0002393_tree ,
OG_05_0002411 (LandPlants) Phylogenetic Tree(s): OG_05_0002411_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c1_28780V3.1
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00207750	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.23	Archaeplastida
AMTR_s00110p00069670	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.2	Archaeplastida
AT3G02080	No alias	Ribosomal protein S19e family protein	0.32	Archaeplastida
AT5G15520	No alias	Ribosomal protein S19e family protein	0.15	Archaeplastida
AT5G61170	No alias	Ribosomal protein S19e family protein	0.56	Archaeplastida
Cpa\|evm.model.tig00021017.6	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.21	Archaeplastida
Cre02.g106600	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.45	Archaeplastida
GSVIVT01007908001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.33	Archaeplastida
GSVIVT01012199001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.43	Archaeplastida
Gb_40460	No alias	component RPS19 of SSU proteome	0.18	Archaeplastida
LOC_Os03g31090.1	No alias	component RPS19 of SSU proteome	0.38	Archaeplastida
MA_10427917g0010	No alias	component RPS19 of SSU proteome	0.36	Archaeplastida
MA_7685779g0010	No alias	component RPS19 of SSU proteome	0.07	Archaeplastida
MA_9301411g0010	No alias	component RPS19 of SSU proteome	0.21	Archaeplastida
Mp1g27380.1	No alias	component RPS19 of SSU proteome	0.44	Archaeplastida
Pp3c27_2780V3.1	No alias	Ribosomal protein S19e family protein	0.06	Archaeplastida
Smo153225	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.3	Archaeplastida
Solyc03g115360.3.1	No alias	component RPS19 of SSU proteome	0.4	Archaeplastida
Solyc12g039120.2.1	No alias	component RPS19 of SSU proteome	0.43	Archaeplastida
Zm00001e002011_P001	No alias	component RPS19 of SSU proteome	0.43	Archaeplastida
Zm00001e038053_P003	No alias	component RPS19 of SSU proteome	0.49	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001266	Ribosomal_S19e	4	138

External Links

No external refs found!

Pp3c1_28780V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation