AT4G25480 (DREB1A, ATCBF3, CBF3)


Aliases : DREB1A, ATCBF3, CBF3

Description : dehydration response element B1A


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001453 (SeedPlants) Phylogenetic Tree(s): OG_06_0001453_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25480
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00077p00141890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00111p00051610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G63030 ddf2 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01035852001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
LOC_Os09g13940.2 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os10g41330.1 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_10431882g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_166248g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_67841g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
Smo38500 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Solyc02g093130.3.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc04g050750.2.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc08g066660.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc08g078410.2.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e006753_P003 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e007332_P001 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014413_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e016421_P001 No alias transcription factor (ERF) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity IDA Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0005982 starch metabolic process RCA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0007623 circadian rhythm RCA Interproscan
BP GO:0009409 response to cold IDA Interproscan
BP GO:0009409 response to cold IMP Interproscan
BP GO:0009409 response to cold IEP Interproscan
BP GO:0009409 response to cold RCA Interproscan
BP GO:0009409 response to cold TAS Interproscan
BP GO:0009414 response to water deprivation IDA Interproscan
BP GO:0009414 response to water deprivation IMP Interproscan
BP GO:0009414 response to water deprivation RCA Interproscan
BP GO:0009631 cold acclimation IMP Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0042538 hyperosmotic salinity response RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000024 maltose biosynthetic process IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0001047 core promoter binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
BP GO:0005983 starch catabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008320 protein transmembrane transporter activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009251 glucan catabolic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0010039 response to iron ion IEP Neighborhood
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
MF GO:0022884 macromolecule transmembrane transporter activity IEP Neighborhood
MF GO:0035250 UDP-galactosyltransferase activity IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0043401 steroid hormone mediated signaling pathway IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0044247 cellular polysaccharide catabolic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
MF GO:1904680 peptide transmembrane transporter activity IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 49 99
No external refs found!