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  5. Pp3c20_2550V3.1

Pp3c20_2550V3.1


Description : Zinc-binding ribosomal protein family protein


Gene families : OG0002317 (Archaeplastida) Phylogenetic Tree(s): OG0002317_tree ,
OG_05_0002166 (LandPlants) Phylogenetic Tree(s): OG_05_0002166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_2550V3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00029660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
AT1G52300 No alias Zinc-binding ribosomal protein family protein 0.39 Archaeplastida
AT3G16080 No alias Zinc-binding ribosomal protein family protein 0.34 Archaeplastida
Cpa|evm.model.tig00020610.80 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
Cre10.g430400 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.38 Archaeplastida
GSVIVT01017081001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 Archaeplastida
GSVIVT01035677001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.25 Archaeplastida
Gb_29003 No alias component RPL37 of LSU proteome component 0.21 Archaeplastida
Gb_33514 No alias component RPL37 of LSU proteome component 0.14 Archaeplastida
LOC_Os02g56990.1 No alias component RPL37 of LSU proteome component 0.31 Archaeplastida
LOC_Os08g03450.1 No alias component RPL37 of LSU proteome component 0.12 Archaeplastida
MA_129829g0010 No alias component RPL37 of LSU proteome component 0.05 Archaeplastida
MA_741492g0010 No alias component RPL37 of LSU proteome component 0.05 Archaeplastida
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.17 Archaeplastida
Pp3c21_9910V3.1 No alias Zinc-binding ribosomal protein family protein 0.22 Archaeplastida
Solyc03g120780.3.1 No alias component RPL37 of LSU proteome component 0.07 Archaeplastida
Solyc06g066660.4.1 No alias component RPL37 of LSU proteome component 0.26 Archaeplastida
Solyc08g068180.3.1 No alias component RPL37 of LSU proteome component 0.07 Archaeplastida
Zm00001e001908_P001 No alias component RPL37 of LSU proteome component 0.21 Archaeplastida
Zm00001e013434_P001 No alias component RPL37 of LSU proteome component 0.29 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 2 53
No external refs found!