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  5. Pp3c22_17180V3.1

Pp3c22_17180V3.1


Description : Translation elongation factor EFG/EF2 protein


Gene families : OG0001646 (Archaeplastida) Phylogenetic Tree(s): OG0001646_tree ,
OG_05_0007031 (LandPlants) Phylogenetic Tree(s): OG_05_0007031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_17180V3.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246330 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.05 Archaeplastida
AT1G45332 No alias Translation elongation factor EFG/EF2 protein 0.05 Archaeplastida
Cpa|evm.model.tig00000144.56 No alias Elongation factor G-1, mitochondrial OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01018186001 No alias Protein biosynthesis.organelle translation... 0.08 Archaeplastida
LOC_Os03g36780.1 No alias EF-G translation elongation factor 0.06 Archaeplastida
Mp1g01140.1 No alias EF-G translation elongation factor 0.02 Archaeplastida
Smo141453 No alias Protein biosynthesis.organelle translation... 0.06 Archaeplastida
Solyc01g090690.4.1 No alias EF-G translation elongation factor 0.04 Archaeplastida
Zm00001e006345_P003 No alias EF-G translation elongation factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 404 470
IPR000795 TF_GTP-bd_dom 89 362
IPR005517 Transl_elong_EFG/EF2_IV 558 678
IPR000640 EFG_V-like 681 765
No external refs found!