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  5. Pp3c23_8000V3.1

Pp3c23_8000V3.1


Description : 5\-3\ exonuclease family protein


Gene families : OG0003315 (Archaeplastida) Phylogenetic Tree(s): OG0003315_tree ,
OG_05_0003232 (LandPlants) Phylogenetic Tree(s): OG_05_0003232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_8000V3.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00265020 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.07 Archaeplastida
Cpa|evm.model.tig00000403.40 No alias DNA damage response.DNA repair mechanisms.homologous... 0.02 Archaeplastida
GSVIVT01008397001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.08 Archaeplastida
GSVIVT01021316001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.09 Archaeplastida
Gb_14686 No alias homologous recombination repair exonuclease (EXO1) 0.06 Archaeplastida
LOC_Os01g56940.1 No alias homologous recombination repair exonuclease (EXO1) 0.03 Archaeplastida
MA_10431686g0010 No alias homologous recombination repair exonuclease (EXO1) 0.04 Archaeplastida
Mp5g20790.1 No alias homologous recombination repair exonuclease (EXO1) 0.02 Archaeplastida
Solyc02g071530.2.1 No alias homologous recombination repair exonuclease (EXO1) 0.07 Archaeplastida
Solyc03g119070.2.1 No alias homologous recombination repair exonuclease (EXO1) 0.03 Archaeplastida
Zm00001e019645_P001 No alias homologous recombination repair exonuclease (EXO1) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!